RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 GABRR1P24046 479 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 PAX6P26367 422 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 EFNB2P52799 333 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 ACTA2P62736 377 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 ACTG2P63267 376 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 ZNF91Q05481 1191 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 KPNB1Q14974 876 aaKnown RBP13.75□□□□□ -0.21
TRIM47-203ENST00000586495 HERPUD1Q15011 391 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 ZNF146Q15072 292 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 GRK1Q15835 563 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 SPIN3Q5JUX0 258 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 CRIP3Q6Q6R5 217 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 OR11H6Q8NGC7 330 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
TRIM47-203ENST00000586495 MBOAT4Q96T53 435 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 RBFOX1Q9NWB1 397 aaKnown RBP13.75□□□□□ -0.21
TRIM47-203ENST00000586495 PITPNC1Q9UKF7 332 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
TRIM47-203ENST00000586495 GMPPBQ9Y5P6 360 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 LINC00312Q9Y6C7 94 aa13.75□□□□□ -0.21
TRIM47-203ENST00000586495 ODF3BA8MYP8 253 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 J3QLW9 94 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 CSF1P09603 554 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 ZNF19P17023 458 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 PRKACAP17612 351 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 BCL3P20749 454 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 NANOS3P60323 173 aaKnown RBP13.74□□□□□ -0.21
TRIM47-203ENST00000586495 DYNC1I2Q13409 638 aaKnown RBP13.74□□□□□ -0.21
TRIM47-203ENST00000586495 FAM189A2Q15884 450 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 OR52N4Q8NGI2 321 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 OR13C3Q8NGS6 347 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 PIFOQ8TCI5 191 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 RPS4Y2Q8TD47 263 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 C4orf36Q96KX1 117 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 SIGLEC9Q9Y336 463 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 PCDHGB5Q9Y5G0 923 aa13.74□□□□□ -0.21
TRIM47-203ENST00000586495 MEX3AA1L020 520 aaKnown RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 FUOMA2VDF0 154 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 E9PQ18 207 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 H3BNX3 289 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 SH2D1BO14796 132 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 MGST3O14880 152 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 MPZL2O60487 215 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 TSPAN15O95858 294 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 IGHA1P01876 353 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 RPSAP08865 295 aaKnown RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 DUSP1P28562 367 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 ERP29P30040 261 aaKnown RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 NPBWR2P48146 333 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 PDZK1IP1Q13113 114 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 ALKBH1Q13686 389 aaKnown RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 MINOS1Q5TGZ0 78 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 CBR4Q8N4T8 237 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 ZNF676Q8N7Q3 588 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 FAM110DQ8TAY7 271 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 LGALS12Q96DT0 336 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 PELI1Q96FA3 418 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 Q96MT0 163 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 NKX3-1Q99801 234 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 C9orf16Q9BUW7 83 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 EXOSC4Q9NPD3 245 aaKnown RBP13.73□□□□□ -0.21
TRIM47-203ENST00000586495 IL36RNQ9UBH0 155 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 TCF19Q9Y242 345 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 MINOS1-NBL1R4GNA1 71 aa13.73□□□□□ -0.21
TRIM47-203ENST00000586495 MEGF8Q7Z7M0 2845 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 H3BUI4 141 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 PSPNO60542 156 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 MT-ND2P03891 347 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 SNU13P55769 128 aaKnown RBP13.72□□□□□ -0.21
TRIM47-203ENST00000586495 GALEQ14376 348 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 SSX2Q16385 188 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 PLA1AQ53H76 456 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 ZBTB49Q6ZSB9 765 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 DYNAPQ8N1N2 210 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 SYS1Q8N2H4 156 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 KLHDC1Q8N7A1 406 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 OR4S1Q8NGB4 309 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 RHOFQ9HBH0 211 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 GSTK1Q9Y2Q3 226 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
TRIM47-203ENST00000586495 DSCAML1Q8TD84 2053 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 TET2Q6N021 2002 aaPredicted RBP13.71□□□□□ -0.21
TRIM47-203ENST00000586495 OR4C45A6NMZ5 311 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 CHST1O43916 411 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.21
TRIM47-203ENST00000586495 CALCBP10092 127 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 RAB13P51153 203 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 MRPL28Q13084 256 aaKnown RBP13.71□□□□□ -0.21
TRIM47-203ENST00000586495 TCF23Q7RTU1 214 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 TRAPPC6BQ86SZ2 158 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 LHFPL3Q86UP9 236 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 SAXO1Q8IYX7 474 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 OR51A4Q8NGJ6 313 aa13.71□□□□□ -0.21
TRIM47-203ENST00000586495 OR13C9Q8NGT0 318 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms