RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 BHLHE23Q8NDY6 225 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 OR10Z1Q8NGY1 313 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 AQP3Q92482 292 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 SDHCQ99643 169 aaPredicted RBP10.71□□□□□ -0.69
VMP1-202ENST00000585847 IFT22Q9H7X7 185 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 ELL3Q9HB65 397 aaPredicted RBP10.71□□□□□ -0.69
VMP1-202ENST00000585847 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 MTFP1Q9UDX5 166 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 LAMP3Q9UQV4 416 aa10.71□□□□□ -0.69
VMP1-202ENST00000585847 MRPS7Q9Y2R9 242 aaKnown RBP10.71□□□□□ -0.69
VMP1-202ENST00000585847 USF3Q68DE3 2245 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 IGKV1-27A0A075B6S5 117 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 TRAV18A0A075B6X5 111 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 B9A039 149 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 RBBP9O75884 186 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 CD55P08174 381 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 RBM11P57052 281 aaKnown RBP10.7□□□□□ -0.7
VMP1-202ENST00000585847 Q6ZR03 302 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 POC5Q8NA72 575 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 GPX8Q8TED1 209 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 HPS1Q92902 700 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 YIPF5Q969M3 257 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 SPACA5Q96QH8 159 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 SELENOIQ9C0D9 397 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 CHST6Q9GZX3 395 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 RIMS4Q9H426 269 aaPredicted RBP10.7□□□□□ -0.7
VMP1-202ENST00000585847 FAIMQ9NVQ4 179 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 TAAR3PQ9P1P4 343 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 IL19Q9UHD0 177 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 GLS2Q9UI32 602 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 DUSP13Q9UII6 198 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
VMP1-202ENST00000585847 MAP1AP78559 2803 aaPredicted RBP10.69□□□□□ -0.7
VMP1-202ENST00000585847 FOXI3A8MTJ6 420 aaPredicted RBP10.69□□□□□ -0.7
VMP1-202ENST00000585847 H7C1Q1 480 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 TNFRSF1AP19438 455 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 SERPINA2P20848 420 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 EFNB2P52799 333 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 GNG2P59768 71 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 MRPS15P82914 257 aaKnown RBP10.69□□□□□ -0.7
VMP1-202ENST00000585847 MEF2DQ14814 521 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 BAK1Q16611 211 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 NKPD1Q17RQ9 610 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 ZNF260Q3ZCT1 412 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 AGAP6Q5VW22 663 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 HAGHLQ6PII5 290 aaPredicted RBP10.69□□□□□ -0.7
VMP1-202ENST00000585847 SNX29P2Q8IUI4 249 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
VMP1-202ENST00000585847 POC1AQ8NBT0 407 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 CHST4Q8NCG5 386 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 TMEM104Q8NE00 496 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 OR5D18Q8NGL1 313 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 NEDD4LQ96PU5 975 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 NRIP2Q9BQI9 281 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 EGLN1Q9GZT9 426 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 FN3KRPQ9HA64 309 aa10.69□□□□□ -0.7
VMP1-202ENST00000585847 RBFOX1Q9NWB1 397 aaKnown RBP10.69□□□□□ -0.7
VMP1-202ENST00000585847 ZSCAN5BA6NJL1 495 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 MFNGO00587 321 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 NDUFS7O75251 213 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 PDCD6O75340 191 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 HTR3BO95264 441 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 PGA5P0DJD9 388 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 DTYMKP23919 212 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 CDKN1AP38936 164 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 GDNFP39905 211 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 KCNJ3P48549 501 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 TAS2R19P59542 299 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 ZNF154Q13106 437 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 RBM39Q14498 530 aaKnown RBP10.68□□□□□ -0.7
VMP1-202ENST00000585847 SRSF7Q16629 238 aaKnown RBP eCLIP10.68□□□□□ -0.7
VMP1-202ENST00000585847 SMIM21Q3B7S5 101 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 SPRNQ5BIV9 151 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 SHEQ5VZ18 495 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 ZNF57Q68EA5 555 aaPredicted RBP10.68□□□□□ -0.7
VMP1-202ENST00000585847 Q6ZTK2 550 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 CALHM1Q8IU99 346 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 Q8TCH9 128 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 ST8SIA4Q92187 359 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 CCL19Q99731 98 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 CACNG6Q9BXT2 260 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 MS4A5Q9H3V2 200 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 ZNF701Q9NV72 531 aaPredicted RBP10.68□□□□□ -0.7
VMP1-202ENST00000585847 TREM2Q9NZC2 230 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 MGAT4AQ9UM21 535 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 ST3GAL6Q9Y274 331 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 SPG11Q96JI7 2443 aa10.68□□□□□ -0.7
VMP1-202ENST00000585847 ANKRD20A5PA0PJZ0 165 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 H0YL77 283 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 M0R233 179 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 MLNRO43193 412 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 LYRM1O43325 122 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 PAX1P15863 534 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 FUT3P21217 361 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 BLVRBP30043 206 aaPredicted RBP10.67□□□□□ -0.7
VMP1-202ENST00000585847 MDH2P40926 338 aaKnown RBP10.67□□□□□ -0.7
VMP1-202ENST00000585847 VEGFCP49767 419 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 PPOXP50336 477 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 ZNF81P51508 661 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms