RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CCL3L1	P16619	93 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	MYL12A	P19105	171 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	EEF1B2	P24534	225 aa	Known RBP	10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	SAA4	P35542	130 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	UBE2E1	P51965	193 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZP1	P60852	638 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZNF146	Q15072	292 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	SPIN3	Q5JUX0	258 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZNF529	Q6P280	563 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	C16orf87	Q6PH81	154 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	TMPRSS11A	Q6ZMR5	421 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	SERPINA12	Q8IW75	414 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR8H2	Q8N162	312 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	FAM58A	Q8N1B3	248 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZNF485	Q8NCK3	441 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR4M1	Q8NGD0	313 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR5D18	Q8NGL1	313 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR5D13	Q8NGL4	314 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	FBLIM1	Q8WUP2	373 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	TSEN15	Q8WW01	171 aa	Known RBP	10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	SSMEM1	Q8WWF3	244 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	DCLRE1B	Q9H816	532 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZNRD1	Q9P1U0	126 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	CLEC2D	Q9UHP7	191 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	DHDH	Q9UQ10	334 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760		A0A1W2PRD5	423 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760		A0A1W2PRF3	423 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760		A0A1W2PRM7	423 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	KDM4B	O94953	1096 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	CYB5A	P00167	134 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	LALBA	P00709	142 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	FBP1	P09467	338 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	OCM2	P0CE71	109 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	OCM	P0CE72	109 aa	Predicted RBP	10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	PIP	P12273	146 aa	Predicted RBP	10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	IER3	P46695	156 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	DLX6	P56179	175 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	ACSM1	Q08AH1	577 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	RPL22L1	Q6P5R6	122 aa	Known RBP	10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	FIP1L1	Q6UN15	594 aa	Known RBP	10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	C17orf107	Q6ZR85	190 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	TCF23	Q7RTU1	214 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	SAXO1	Q8IYX7	474 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR52N1	Q8NH53	320 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	TBC1D15	Q8TC07	691 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	SMIM19	Q96E16	107 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	TMEM80	Q96HE8	168 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	HMG20A	Q9NP66	347 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	TNFRSF19	Q9NS68	423 aa		10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.86	□□□□□ -0.67
SREBF1-223	ENST00000584760		A0A1W2PPH5	198 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	MEIOC	A2RUB1	952 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	FAM181B	A6NEQ2	426 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	OGG1	O15527	345 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	PSPN	O60542	156 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	HCK	P08631	526 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	CALCB	P10092	127 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	PRKACA	P17612	351 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	OMG	P23515	440 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	DUSP1	P28562	367 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	SOX2	P48431	317 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	GABPB1	Q06547	395 aa	Predicted RBP	10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	KISS1	Q15726	138 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	GDPD3	Q7L5L3	318 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR52N4	Q8NGI2	321 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR51A2	Q8NGJ7	313 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR5D14	Q8NGL3	314 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	GPR148	Q8TDV2	347 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	TFAP2C	Q92754	450 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	GGH	Q92820	318 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	SNX22	Q96L94	193 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	SLITRK2	Q9H156	845 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	NEK6	Q9HC98	313 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	BABAM2	Q9NXR7	383 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	CNOT2	Q9NZN8	540 aa	Known RBP	10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	FAM96B	Q9Y3D0	163 aa		10.85	□□□□□ -0.67
SREBF1-223	ENST00000584760	KIAA2026	Q5HYC2	2103 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	EFCAB10	A6NFE3	127 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	C17orf98	A8MV24	154 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	XPNPEP2	O43895	674 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	RBP4	P02753	201 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	MDK	P21741	143 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR3A1	P47881	315 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	SNU13	P55769	128 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	EDDM3B	P56851	147 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	ERVFRD-1	P60508	538 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	RPL15	P61313	204 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	RELB	Q01201	579 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	ST3GAL4	Q11206	333 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	EDDM3A	Q14507	147 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	TAF9	Q16594	264 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	DMKN	Q6E0U4	476 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR4S1	Q8NGB4	309 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	DYRK2	Q92630	601 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	TMEM106A	Q96A25	262 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	AJUBA	Q96IF1	538 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms