RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 BSPH1Q075Z2 132 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 ZNF154Q13106 437 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 MEF2DQ14814 521 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 DAZAP2Q15038 168 aaPredicted RBP8.93□□□□□ -0.98
SS18-217ENST00000580958 TATDN3Q17R31 274 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 FBXL19-AS1Q494R0 122 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 NHLRC3Q5JS37 347 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 ATAD3CQ5T2N8 411 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 PRAMEF6Q5VXH4 476 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 ZNF554Q86TJ5 538 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 FAM58AQ8N1B3 248 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 BPIFB2Q8N4F0 458 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 SPERTQ8NA61 448 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 OR51S1Q8NGJ8 323 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 LILRB4Q8NHJ6 448 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 CHAC2Q8WUX2 184 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 MAFIPQ8WZ33 124 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 SNAPC3Q92966 411 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 FBXW5Q969U6 566 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 POM121Q96HA1 1249 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 NEURL2Q9BR09 285 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 OCSTAMPQ9BR26 566 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 HDHD3Q9BSH5 251 aaPredicted RBP8.93□□□□□ -0.98
SS18-217ENST00000580958 BEX2Q9BXY8 128 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 MRPL37Q9BZE1 423 aaKnown RBP8.93□□□□□ -0.98
SS18-217ENST00000580958 BEX1Q9HBH7 125 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 TAAR3PQ9P1P4 343 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 ZNF230Q9UIE0 474 aaPredicted RBP8.93□□□□□ -0.98
SS18-217ENST00000580958 ERRFI1Q9UJM3 462 aaPredicted RBP8.93□□□□□ -0.98
SS18-217ENST00000580958 FLVCR2Q9UPI3 526 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 RAI1Q7Z5J4 1906 aaPredicted RBP8.93□□□□□ -0.98
SS18-217ENST00000580958 USP24Q9UPU5 2620 aa8.93□□□□□ -0.98
SS18-217ENST00000580958 CACNA1BQ00975 2339 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 IGLV3-9A0A075B6K5 115 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 A0A1B0GWJ7 208 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 UBE2QL1A1L167 161 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 ZSCAN5BA6NJL1 495 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 DISC1C4P0D8 188 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 CDIPTO14735 213 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 NDUFB6O95139 128 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 PMP2P02689 132 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 PGA5P0DJD9 388 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 AMY2BP19961 511 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 FUT3P21217 361 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 DUSP1P28562 367 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 HRH1P35367 487 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 GMFBP60983 142 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 CD300CQ08708 224 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 MAB21L1Q13394 359 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 IKZF1Q13422 519 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 SNTB1Q13884 538 aaKnown RBP8.92□□□□□ -0.98
SS18-217ENST00000580958 IL13RA2Q14627 380 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 CDSNQ15517 529 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 NKPD1Q17RQ9 610 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 MPV17LQ2QL34 196 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 RNASE10Q5GAN6 216 aaKnown RBP8.92□□□□□ -0.98
SS18-217ENST00000580958 SLC22A25Q6T423 547 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 ZNF826PQ6ZT77 177 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 HOGA1Q86XE5 327 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 C11orf53Q8IXP5 236 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 NUP37Q8NFH4 326 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 OR2Z1Q8NG97 314 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 OR4K15Q8NH41 348 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 LINC01560Q8TB33 94 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 MRPL24Q96A35 216 aaKnown RBP8.92□□□□□ -0.98
SS18-217ENST00000580958 SLC6A7Q99884 636 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 CMSS1Q9BQ75 279 aaKnown RBP8.92□□□□□ -0.98
SS18-217ENST00000580958 GINS4Q9BRT9 223 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 ST6GALNAC5Q9BVH7 336 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 ZNF442Q9H7R0 627 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 NGBQ9NPG2 151 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 ZNF701Q9NV72 531 aaPredicted RBP8.92□□□□□ -0.98
SS18-217ENST00000580958 POLDIP2Q9Y2S7 368 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 KIAA2026Q5HYC2 2103 aa8.92□□□□□ -0.98
SS18-217ENST00000580958 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
SS18-217ENST00000580958 ARFGEF3Q5TH69 2177 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 A0A1B0GUH1 482 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 HMX3A6NHT5 357 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 A6NLC8 198 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 PRSS44E7EML9 344 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 NXPH2O95156 264 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 TBPP20226 339 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 GRNP28799 593 aaKnown RBP8.91□□□□□ -0.98
SS18-217ENST00000580958 CD200P41217 278 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 RAG2P55895 527 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 ERVK11-1P61568 191 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 MZT1Q08AG7 82 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 RBMS2Q15434 407 aaKnown RBP8.91□□□□□ -0.98
SS18-217ENST00000580958 MPPED2Q15777 294 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 MICBQ29980 383 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 NCMAPQ5T1S8 102 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 IDO2Q6ZQW0 420 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 LINC00596Q86U02 117 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 Q8IYB0 196 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 BEST4Q8NFU0 473 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 OR5H2Q8NGV7 314 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 NRIP2Q9BQI9 281 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 TLNRD1Q9H1K6 362 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 PLK3Q9H4B4 646 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms