RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GYPAP02724 150 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 AMY2BP19961 511 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 SOX6P35712 828 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 ART1P52961 327 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 RBM11P57052 281 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 PLA2G7Q13093 441 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 PIGYQ3MUY2 71 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 SPIN3Q5JUX0 258 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 LGALS14Q8TCE9 139 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 TMEM59Q9BXS4 323 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 SELENOIQ9C0D9 397 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 SEBOXQ9HB31 216 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 CCDC59Q9P031 241 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 ZNF222Q9UK12 451 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 ST3GAL6Q9Y274 331 aa13.29□□□□□ -0.28
CSNK1D-212ENST00000580061 NDUFA2O43678 99 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 TFF1P04155 84 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 SLC25A16P16260 332 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 RAB6AP20340 208 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 DUSP1P28562 367 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 PRDX2P32119 198 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 CEBPDP49716 269 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 RPS27AP62979 156 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 DYNC1I2Q13409 638 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 IL13RA2Q14627 380 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 ATPAF1Q5TC12 328 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 DCDC5Q6ZRR9 648 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 CD177Q8N6Q3 437 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 OR5H6Q8NGV6 325 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 ACOT12Q8WYK0 555 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 AP3S1Q92572 193 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 PTX4Q96A99 478 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 Q96M66 194 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 TM2D1Q9BX74 207 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 DNTTIP1Q9H147 329 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 LPAR5Q9H1C0 372 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 OR14J1Q9UGF5 321 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 RAB22AQ9UL26 194 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 SPATA2Q9UM82 520 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
CSNK1D-212ENST00000580061 CEACAM18A8MTB9 384 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 HAND1O96004 215 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 GABRA2P47869 451 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 EFNB2P52799 333 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 TAF9Q16594 264 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 Q6P435 159 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF788Q6ZQV5 615 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 LINC00596Q86U02 117 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 SPICQ8N5J4 248 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 Q96MF0 132 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 CCL13Q99616 98 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 GAL3ST1Q99999 423 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 URM1Q9BTM9 101 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 NARFLQ9H6Q4 476 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF665Q9H7R5 613 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 GLS2Q9UI32 602 aa13.27□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A10PA6NDY2 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A18PA6NE21 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A16PA6NEW6 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A20PA6NIJ5 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A8PA6NJQ4 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A7PA6NKC0 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A22PA8MWA6 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A12PA8MX19 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A5PA8MXJ8 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A23PA8MXZ1 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 SH2D1BO14796 132 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 CHRM2P08172 466 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A15PP0C7V4 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A13PP0C7W8 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A14PP0C7W9 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM90A24PP0C7X0 464 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 CPT2P23786 658 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 LMO1P25800 156 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 PDCD1Q15116 288 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 MPV17LQ2QL34 196 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 DOCK11Q5JSL3 2073 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 METAP1DQ6UB28 335 aaPredicted RBP13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM89BQ8N5H3 189 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 SDSLQ96GA7 329 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 POM121Q96HA1 1249 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 GAFA1Q96PS6 74 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 NICN1Q9BSH3 213 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 IFT22Q9H7X7 185 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 PATZ1Q9HBE1 687 aaKnown RBP13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 COMMD3Q9UBI1 195 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 CTSZQ9UBR2 303 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 MIOXQ9UGB7 285 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 MAB21L2Q9Y586 359 aa13.26□□□□□ -0.29
CSNK1D-212ENST00000580061 A0A096LNT2 108 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 A0A0A6YYD4 124 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 IGHV4-61A0A0C4DH41 118 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms