RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 VCXQ9H320 206 aa12.14□□□□□ -0.47
SS18-212ENST00000579061 DPAGT1Q9H3H5 408 aa12.14□□□□□ -0.47
SS18-212ENST00000579061 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
SS18-212ENST00000579061 HMG20AQ9NP66 347 aa12.14□□□□□ -0.47
SS18-212ENST00000579061 RBFOX1Q9NWB1 397 aaKnown RBP12.14□□□□□ -0.47
SS18-212ENST00000579061 ZNRD1Q9P1U0 126 aa12.14□□□□□ -0.47
SS18-212ENST00000579061 GLS2Q9UI32 602 aa12.14□□□□□ -0.47
SS18-212ENST00000579061 A0A1B0GUS0 222 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 EFCAB10A6NFE3 127 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 POM121CA8CG34 1229 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 ANKRD65E5RJM6 399 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 OGG1O15527 345 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 KDM4BO94953 1096 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 INMTO95050 263 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 RBP4P02753 201 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 GTF2A1P52655 376 aaPredicted RBP12.13□□□□□ -0.47
SS18-212ENST00000579061 DLX1P56177 255 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 MIDNQ504T8 468 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 OR2G6Q5TZ20 316 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 HCP5Q6MZN7 132 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 CRIP3Q6Q6R5 217 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 GDPD3Q7L5L3 318 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 OR4M1Q8NGD0 313 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 PPP1R35Q8TAP8 253 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 GPR148Q8TDV2 347 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 FBLIM1Q8WUP2 373 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 DYRK2Q92630 601 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 GGHQ92820 318 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
SS18-212ENST00000579061 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 PLCXD1Q9NUJ7 323 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 CHCHD3Q9NX63 227 aaKnown RBP12.13□□□□□ -0.47
SS18-212ENST00000579061 BABAM2Q9NXR7 383 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 CNOT2Q9NZN8 540 aaKnown RBP12.13□□□□□ -0.47
SS18-212ENST00000579061 MMP24Q9Y5R2 645 aa12.13□□□□□ -0.47
SS18-212ENST00000579061 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 TMEM82A0PJX8 343 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 MEIOCA2RUB1 952 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 FAM181BA6NEQ2 426 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 CRYBA1P05813 215 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 CD2P06729 351 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 HCKP08631 526 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 PRKACAP17612 351 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 RAB3AP20336 220 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 SAA4P35542 130 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 DLX6P56179 175 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
SS18-212ENST00000579061 GABPB1Q06547 395 aaPredicted RBP12.12□□□□□ -0.47
SS18-212ENST00000579061 ZNF273Q14593 569 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 KISS1Q15726 138 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 XAF1Q6GPH4 301 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 C17orf107Q6ZR85 190 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 RGP1Q92546 391 aaPredicted RBP12.12□□□□□ -0.47
SS18-212ENST00000579061 RFT1Q96AA3 541 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 SPACA5Q96QH8 159 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 IL36RNQ9UBH0 155 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 PCDHGB5Q9Y5G0 923 aa12.12□□□□□ -0.47
SS18-212ENST00000579061 A0A1W2PRD5 423 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 A0A1W2PRF3 423 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 A0A1W2PRM7 423 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 SH2D1BO14796 132 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 MGST3O14880 152 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 ANGPTL7O43827 346 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 NDUFA7O95182 113 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 PAHP00439 452 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 IGHV4-59P01825 116 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 GNAO1P09471 354 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 ZNF728P0DKX0 622 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 CCL3L1P16619 93 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 ERP29P30040 261 aaKnown RBP12.11□□□□□ -0.47
SS18-212ENST00000579061 BMXP51813 675 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 EDDM3BP56851 147 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 ZP1P60852 638 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
SS18-212ENST00000579061 ST3GAL4Q11206 333 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 PXT1Q8NFP0 134 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 OR52N4Q8NGI2 321 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
SS18-212ENST00000579061 TNFRSF19Q9NS68 423 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 ZNF281Q9Y2X9 895 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
SS18-212ENST00000579061 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 H0YJX3 145 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 MAGEB3O15480 346 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 PSPNO60542 156 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 ALDOBP05062 364 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 LMO1P25800 156 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 SLC34A1Q06495 639 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 GRK1Q15835 563 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 DMKNQ6E0U4 476 aaPredicted RBP12.1□□□□□ -0.47
SS18-212ENST00000579061 LAIR2Q6ISS4 152 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 SHISA2Q6UWI4 295 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms