RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 PIFOQ8TCI5 191 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RORBQ92753 470 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MYDGFQ969H8 173 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PGAM5Q96HS1 289 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 NKX3-1Q99801 234 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 CCDC90BQ9GZT6 254 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PBOV1Q9GZY1 135 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 NIPAL2Q9H841 368 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 C1orf123Q9NWV4 160 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 CHCHD3Q9NX63 227 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 BLOC1S6Q9UL45 172 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GTF2A1LQ9UNN4 478 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 SLC22A13Q9Y226 551 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 TCF19Q9Y242 345 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LSM4Q9Y4Z0 139 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 NKX6-3A6NJ46 265 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 H3BSH0 61 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 MYL12BO14950 172 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 NDUFB3O43676 98 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 SYNGR1O43759 233 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 APOC1P02654 83 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TTRP02766 147 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 CA6P23280 308 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 CHATP28329 748 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 VDAC2P45880 294 aaPredicted RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TGM4P49221 684 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DLX1P56177 255 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 CAV3P56539 151 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DGCR2P98153 550 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ZNF92Q03936 586 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 PRB3Q04118 309 aaPredicted RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 MALLQ13021 153 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 GFOD2Q3B7J2 385 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 KCTD21Q4G0X4 260 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 BCL2L15Q5TBC7 163 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 RNLSQ5VYX0 342 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TMPRSS11AQ6ZMR5 421 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 PGAP1Q75T13 922 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 PRSS48Q7RTY5 328 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 KCTD20Q7Z5Y7 419 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 CATSPERDQ86XM0 798 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 FGFRL1Q8N441 504 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 FAM216BQ8N7L0 139 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 NANOGP1Q8N7R0 232 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ZFP41Q8N8Y5 198 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR5AU1Q8NGC0 362 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR2G2Q8NGZ5 317 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR52N1Q8NH53 320 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 C17orf50Q8WW18 174 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 SGK3Q96BR1 496 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 MRPL48Q96GC5 212 aaKnown RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 REEP6Q96HR9 211 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 LYZL4Q96KX0 146 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR5M11Q96RB7 305 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 YTHDF1Q9BYJ9 559 aaKnown RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR10A2Q9H208 303 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 MOB1AQ9H8S9 216 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 PALMDQ9NP74 551 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 C14orf119Q9NWQ9 140 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 MRPL15Q9P015 296 aaKnown RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 NUFIP1Q9UHK0 495 aaKnown RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR52A1Q9UKL2 312 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 LSM2Q9Y333 95 aaKnown RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 SIRT4Q9Y6E7 314 aaPredicted RBP5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TRBV23-1A0A0A0MS06 115 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 A0A1B0GTI1 187 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 hCG_38984A0A1B0GV85 526 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 A0A1B0GW55 424 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 hCG_1807616A0A1W2PRN6 198 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 A6NDX4 124 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ACOD1A6NK06 481 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 A6NLC8 198 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 OR4C45A6NMZ5 311 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 CD300LBA8K4G0 201 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 XRCC2O43543 280 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 IGLV3-1P01715 115 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DUX4L2P0CJ85 424 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DUX4L3P0CJ86 424 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DUX4L4P0CJ87 422 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DUX4L5P0CJ88 424 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DUX4L6P0CJ89 424 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 DUX4L7P0CJ90 424 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 SLC6A1P30531 599 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 GBX2P52951 348 aaPredicted RBP5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 WNT4P56705 351 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 FAM3AP98173 230 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ALKBH1Q13686 389 aaKnown RBP5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 CDK5R1Q15078 307 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TBCEQ15813 527 aaPredicted RBP5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TIGD6Q17RP2 521 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ODF4Q2M2E3 257 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 TCTEX1D4Q5JR98 221 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 STUMQ69YW2 141 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 FDX2Q6P4F2 183 aa5.76□□□□□ -1.49
CDK5RAP3-209ENST00000578663 ZNF773Q6PK81 442 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms