RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MAGEL2Q9UJ55 1249 aa7.98□□□□□ -1.13
NPLOC4-220ENST00000576940 LAMP5Q9UJQ1 280 aa7.98□□□□□ -1.13
NPLOC4-220ENST00000576940 LINC00312Q9Y6C7 94 aa7.98□□□□□ -1.13
NPLOC4-220ENST00000576940 PLECQ15149 4684 aaKnown RBP7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 KIAA2026Q5HYC2 2103 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 FAM230AA0A1W2PPH8 454 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 ACOD1A6NK06 481 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 PRR23D1E9PI22 279 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 H3BN98 237 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 CCL24O00175 119 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 DLGAP1O14490 977 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 ARPC2O15144 300 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 PSPNO60542 156 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 DHRS3O75911 302 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 TTRP02766 147 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 PRR23D2P0DMB1 279 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 LYL1P12980 280 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 PEX2P28328 305 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 CHATP28329 748 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 DUSP1P28562 367 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 BDH1Q02338 343 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 MFGE8Q08431 387 aaPredicted RBP7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 IL24Q13007 206 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 GRK1Q15835 563 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 MICAQ29983 383 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 DEFB136Q30KP8 78 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 TPTE2P1Q5T6R2 138 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 ZFAND6Q6FIF0 208 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 TRAPPC6BQ86SZ2 158 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 EGFL6Q8IUX8 553 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 CPOQ8IVL8 374 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 BBS1Q8NFJ9 593 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 OR14K1Q8NGZ2 314 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 SLAMF9Q96A28 289 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 RCHY1Q96PM5 261 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 DGCR6LQ9BY27 220 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 MROQ9BYG7 248 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 ZNF286AQ9HBT8 521 aa7.97□□□□□ -1.13
NPLOC4-220ENST00000576940 IGKV1-27A0A075B6S5 117 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 A0A1B0GTI1 187 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 SERPINE3A8MV23 424 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 LY6LH3BQJ8 138 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 BUB1B-PAK6H3BSN5 160 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 M0QZK8 103 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 MAGEB4O15481 346 aaPredicted RBP7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 HAND1O96004 215 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 MRPL3P09001 348 aaKnown RBP7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 CALCBP10092 127 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 HSD17B1P14061 328 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 GABRR1P24046 479 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 CDK2P24941 298 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 SLC6A1P30531 599 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 RPS7P62081 194 aaKnown RBP7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 GINS1Q14691 196 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 C9orf66Q5T8R8 295 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 CYP2R1Q6VVX0 501 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 RTN4RL2Q86UN3 420 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 C10orf67Q8IYJ2 551 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 Q8NFD4 153 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 TEX47Q8TBZ9 253 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 ZNF596Q8TC21 504 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 CHPT1Q8WUD6 406 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 ITFG2Q969R8 447 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 CEP19Q96LK0 163 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 PKIBQ9C010 78 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 DCLRE1BQ9H816 532 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 PALMDQ9NP74 551 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 GTF2A1LQ9UNN4 478 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 COPS3Q9UNS2 423 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 MOB4Q9Y3A3 225 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 HSPE1-MOB4S4R3N1 261 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 V9GYS6 101 aa7.96□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A18PA6NE21 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A16PA6NEW6 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A20PA6NIJ5 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A9PA6NNJ1 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A12PA8MX19 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A5PA8MXJ8 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 SEC14L6B5MCN3 397 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 H3BSH0 61 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 TOR1AO14656 332 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 RPLP1P05386 114 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A15PP0C7V4 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A13PP0C7W8 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A14PP0C7W9 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM90A24PP0C7X0 464 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM106CPP0CH98 169 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 NPBWR2P48146 333 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 ARHGDIBP52566 201 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 GP2P55259 537 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 SNU13P55769 128 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 ACTR3P61158 418 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 RBM39Q14498 530 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 HNF4GQ14541 408 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 KPNB1Q14974 876 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 UBE2V2Q15819 145 aa7.95□□□□□ -1.14
NPLOC4-220ENST00000576940 HLA-DRB5Q30154 266 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms