RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LPAR6P43657 344 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 APH1AQ96BI3 265 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 RSPO3Q9BXY4 272 aaPredicted RBP15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 TMPRSS5Q9H3S3 457 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 CASP8AP2Q9UKL3 1982 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 ACACAQ13085 2346 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 MGST1P10620 155 aaKnown RBP15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 CLN3Q13286 438 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF260Q3ZCT1 412 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 LHFPL2Q6ZUX7 228 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SNX22Q96L94 193 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 GABRG3Q99928 467 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 AURKAIP1Q9NWT8 199 aaPredicted RBP15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SH3BGRL2Q9UJC5 107 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 LIPT2A6NK58 231 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SPINK4O60575 86 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SOX7Q9BT81 388 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 LPAR5Q9H1C0 372 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SLC2A9Q9NRM0 540 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 MYLKQ15746 1914 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 MPTX1A8MV57 137 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 GALNSP34059 522 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SNCAP37840 140 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 ANKRD55Q3KP44 614 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 SLC36A1Q7Z2H8 476 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 FAM185AQ8N0U4 392 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 COMMD1Q8N668 190 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 PCOLCE2Q9UKZ9 415 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 FER1L5A0AVI2 2057 aa15.76■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF320A2RRD8 509 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 H0Y8G0 127 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 FAHD2BQ6P2I3 314 aaPredicted RBP15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 H2BFWTQ7Z2G1 175 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 FAHD2AQ96GK7 314 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 THOC3Q96J01 351 aaKnown RBP15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 MENTQ9BUN1 341 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 DEFB127Q9H1M4 99 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 C3orf85A0A1B0GTC6 90 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 CCL7P80098 99 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 H3F3AP84243 136 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF880Q6PDB4 577 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 SLC22A18ASQ8N1D0 253 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 CTHRC1Q96CG8 243 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 ADGRG7Q96K78 797 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 FAM210BQ96KR6 192 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 UTP23Q9BRU9 249 aaKnown RBP15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 FAM103A1Q9BTL3 118 aaKnown RBP15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 HSF4Q9ULV5 492 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 AQP7O14520 342 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 TIMM8AO60220 97 aaPredicted RBP15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 MT-CO2P00403 227 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 SLC25A4P12235 298 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 NTF3P20783 257 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 MPGP29372 298 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF154Q13106 437 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 POM121Q96HA1 1249 aa15.75■□□□□ 0.11
ATPAF1-214ENST00000576409 TRBV5-7A0A0A0MS05 114 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 NKX2-6A6NCS4 301 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 RBFOX3A6NFN3 312 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 CHRNA7P36544 502 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF345Q14585 488 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF439Q8NDP4 499 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 DEFB108BQ8NET1 73 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ABHD5Q8WTS1 349 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 CHST1O43916 411 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ACTL6AO96019 429 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 RPS4Y1P22090 263 aaKnown RBP15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 FOXK1P85037 733 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 EFNB1P98172 346 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 C15orf54Q8N8G6 183 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 APCDD1LQ8NCL9 501 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 OR13G1Q8NGZ3 307 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 OR4A16Q8NH70 328 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ERGIC1Q969X5 290 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 MARVELD3Q96A59 401 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 CCDC74BQ96LY2 380 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF385AQ96PM9 386 aaKnown RBP15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF251Q9BRH9 671 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 SLC25A22Q9H936 323 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 CACNG5Q9UF02 275 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 TMED3Q9Y3Q3 217 aa15.74■□□□□ 0.11
ATPAF1-214ENST00000576409 SMIM10L1P0DMW3 83 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 DYNLT3P51808 116 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 PLAC9Q5JTB6 97 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 SMIM10Q96HG1 83 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 SARGQ9BW04 601 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 MSL2Q9HCI7 577 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 SIT1Q9Y3P8 196 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 CD200P41217 278 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 ERVS71-1P61550 626 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 RABEPKQ7Z6M1 372 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 ANKRD37Q7Z713 158 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 OR10P1Q8NGE3 313 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 A0A0G2JMZ2 1700 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 LRRC37A2A6NM11 1700 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 IGLV1-36A0A0B4J1U3 117 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 TGFBR3LH3BV60 316 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 MMP7P09237 267 aaPredicted RBP15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 FABP6P51161 128 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms