RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 DUX4Q9UBX2 424 aa7.14□□□□□ -1.27
NUP88-211ENST00000575976 MIOXQ9UGB7 285 aa7.14□□□□□ -1.27
NUP88-211ENST00000575976 OR14J1Q9UGF5 321 aa7.14□□□□□ -1.27
NUP88-211ENST00000575976 ZNF222Q9UK12 451 aa7.14□□□□□ -1.27
NUP88-211ENST00000575976 MAB21L2Q9Y586 359 aa7.14□□□□□ -1.27
NUP88-211ENST00000575976 SLC17A2O00624 439 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 TMPRSS2O15393 492 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 ZNF780AO75290 641 aaPredicted RBP7.13□□□□□ -1.27
NUP88-211ENST00000575976 FCN3O75636 299 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 CSTBP04080 98 aaKnown RBP7.13□□□□□ -1.27
NUP88-211ENST00000575976 SLC2A2P11168 524 aaPredicted RBP7.13□□□□□ -1.27
NUP88-211ENST00000575976 SELLP14151 372 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 VBP1P61758 197 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 ZNF146Q15072 292 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 P2RY14Q15391 338 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 RAB11BQ15907 218 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 CTF1Q16619 201 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 DGUOKQ16854 277 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 TMEM249Q2WGJ8 235 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 SLC22A6Q4U2R8 563 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 ELP2Q6IA86 826 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 OR10K2Q6IF99 312 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 METAP1DQ6UB28 335 aaPredicted RBP7.13□□□□□ -1.27
NUP88-211ENST00000575976 ZNF841Q6ZN19 808 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 OSR2Q8N2R0 312 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 FGFRL1Q8N441 504 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 FAM216BQ8N7L0 139 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 OR8B3Q8NGG8 313 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 TBC1D15Q8TC07 691 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 RAB39BQ96DA2 213 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 SDSLQ96GA7 329 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 C18orf12Q96KH6 178 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 GAFA1Q96PS6 74 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 OR8B2Q96RD0 313 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 DNTTIP1Q9H147 329 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 KCNK15Q9H427 330 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 BANF2Q9H503 90 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 KAAG1Q9UBP8 84 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 GHRLQ9UBU3 117 aa7.13□□□□□ -1.27
NUP88-211ENST00000575976 A0A0B4J203 849 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 NKX6-3A6NJ46 265 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 IFITM5A6NNB3 132 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 NOTOA8MTQ0 251 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 DVL1O14640 695 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 SIGLEC5O15389 551 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 PHF1O43189 567 aaPredicted RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 HAND1O96004 215 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 HEXAP06865 529 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 CHRM2P08172 466 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 INHBBP09529 407 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 UBBP0CG47 229 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 IGHV4-31P0DP07 118 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 GTF2F2P13984 249 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 CPT2P23786 658 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 ZFP36P26651 326 aaKnown RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 RPS19P39019 145 aaKnown RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 SERPINB10P48595 397 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 PITPNBP48739 271 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 BMXP51813 675 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 CAPZA1P52907 286 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 GNB2P62879 340 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 IL13RA1P78552 427 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 COL10A1Q03692 680 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 IKZF1Q13422 519 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 GPR176Q14439 515 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 C2orf76Q3KRA6 126 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 PIGYQ3MUY2 71 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 WDR25Q64LD2 544 aaPredicted RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 Q6P435 159 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 FIP1L1Q6UN15 594 aaKnown RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 NLRC3Q7RTR2 1065 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 SLC36A1Q7Z2H8 476 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 BIVMQ86UB2 503 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 ZNRF1Q8ND25 227 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 TMEM104Q8NE00 496 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 OR51D1Q8NGF3 324 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 OR51T1Q8NGJ9 327 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 FAM46BQ96A09 425 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 MED30Q96HR3 178 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 SEBOXQ9HB31 216 aaPredicted RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 LPAR2Q9HBW0 351 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 PCDHB16Q9NRJ7 776 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 ZNF581Q9P0T4 197 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 STEAP1Q9UHE8 339 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 DAPK2Q9UIK4 370 aa7.12□□□□□ -1.27
NUP88-211ENST00000575976 ZNF469Q96JG9 3925 aaPredicted RBP7.12□□□□□ -1.27
NUP88-211ENST00000575976 TMEM82A0PJX8 343 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 TMEM14DPA8MWL7 114 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 KIAA1324LA8MWY0 1029 aaPredicted RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 AIPO00170 330 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 SIRPB1O00241 398 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 SH2D1BO14796 132 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 GEMIN2O14893 280 aaKnown RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 DEGS1O15121 323 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 LDLRAD4O15165 306 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 NDUFB3O43676 98 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 FOXH1O75593 365 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms