RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TPRA1Q86W33 373 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 OSR2Q8N2R0 312 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF561Q8N587 486 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 Q8NFD4 153 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 MSI2Q96DH6 328 aaKnown RBP11.64□□□□□ -0.55
RPAIN-217ENST00000575711 SDSLQ96GA7 329 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 GFI1Q99684 422 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 A0A1B0GW55 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DVL1O14640 695 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 SH2D1BO14796 132 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 PHF1O43189 567 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 CD5LO43866 347 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 TGFAP01135 160 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L2P0CJ85 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L3P0CJ86 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L4P0CJ87 422 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L5P0CJ88 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L6P0CJ89 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L7P0CJ90 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 GTF2F2P13984 249 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUSP1P28562 367 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 SDC2P34741 201 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 RPL5P46777 297 aaKnown RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 CAPZA1P52907 286 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 OR10A3P58181 314 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 LSM3P62310 102 aaKnown RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 COL10A1Q03692 680 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 RAB11BQ15907 218 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4L9Q6RFH8 374 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 ZNRF1Q8ND25 227 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 TMEM185AQ8NFB2 350 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 OR51T1Q8NGJ9 327 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 CST11Q9H112 138 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 RNF167Q9H6Y7 350 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 SEBOXQ9HB31 216 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 DUX4Q9UBX2 424 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 SLC25A10Q9UBX3 287 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 OR5V1Q9UGF6 321 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 MAB21L2Q9Y586 359 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF469Q96JG9 3925 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-217ENST00000575711 CR1P17927 2039 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 A0A1W2PP11 408 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 KIAA1324LA8MWY0 1029 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-217ENST00000575711 GPR37O15354 613 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 CRTAPO75718 401 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-217ENST00000575711 BPNT1O95861 308 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 SELLP14151 372 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF44P15621 663 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 ZFP36P26651 326 aaKnown RBP11.62□□□□□ -0.55
RPAIN-217ENST00000575711 IL13RA2Q14627 380 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 PIGYQ3MUY2 71 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 NHLRC3Q5JS37 347 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 HES5Q5TA89 166 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 CD276Q5ZPR3 534 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 FAM166AQ6J272 317 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 CLEC9AQ6UXN8 241 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 GLCCI1Q86VQ1 547 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 ANKRD13BQ86YJ7 626 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 ASCC1Q8N9N2 400 aaKnown RBP11.62□□□□□ -0.55
RPAIN-217ENST00000575711 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 MRPS24Q96EL2 167 aaKnown RBP11.62□□□□□ -0.55
RPAIN-217ENST00000575711 C1orf147Q96MC9 270 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-217ENST00000575711 SMR3AQ99954 134 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 STEAP1Q9UHE8 339 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 ST3GAL6Q9Y274 331 aa11.62□□□□□ -0.55
RPAIN-217ENST00000575711 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 SMIM30A4D0T7 59 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 IFITM5A6NNB3 132 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 NOTOA8MTQ0 251 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 AIPO00170 330 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 DEGS1O15121 323 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 LY6G6DO95868 133 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 OR2H2O95918 312 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 ARSBP15848 533 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 MGMTP16455 207 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 NDUFB7P17568 137 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 DVL1P1P54792 670 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-217ENST00000575711 CAV3P56539 151 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 RBM11P57052 281 aaKnown RBP11.61□□□□□ -0.55
RPAIN-217ENST00000575711 MXD1Q05195 221 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 KRTAP1-1Q07627 177 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 SCN1BQ07699 218 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 P2RY14Q15391 338 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 C11orf91Q3C1V1 193 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 LINC00596Q86U02 117 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 CHST4Q8NCG5 386 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 PPP1R35Q8TAP8 253 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 SLC25A28Q96A46 364 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 SNX22Q96L94 193 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 BANF2Q9H503 90 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 HIF1ANQ9NWT6 349 aa11.61□□□□□ -0.55
RPAIN-217ENST00000575711 KCNS2Q9ULS6 477 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms