RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 SYS1Q8N2H4 156 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 OR52N4Q8NGI2 321 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 OR52I1Q8NGK6 324 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 OR13C9Q8NGT0 318 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 APH1BQ8WW43 257 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 SPSB1Q96BD6 273 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 SPACA5Q96QH8 159 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 CHST6Q9GZX3 395 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 MEGF9Q9H1U4 602 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 ERVK13-1Q9NX77 482 aa21.18■□□□□ 0.98
NPLOC4-215ENST00000574095 PRKACAP17612 351 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 TGFBR2P37173 567 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 LGALS4P56470 323 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 RAB40BQ12829 278 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 PDZK1IP1Q13113 114 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 LY6EQ16553 131 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 TREML4Q6UXN2 200 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 MYCBPQ99417 103 aaPredicted RBP21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 CITED1Q99966 193 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 PPA2Q9H2U2 334 aa21.17■□□□□ 0.98
NPLOC4-215ENST00000574095 TRBV2A0A0J9YWF9 115 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 E9PI62 339 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 ZNF728P0DKX0 622 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 GABRR1P24046 479 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 PROK1P58294 105 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 TPRX1Q8N7U7 411 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 C16orf95Q9H693 158 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 SEBOXQ9HB31 216 aaPredicted RBP21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 INPP5EQ9NRR6 644 aa21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 RPL36Q9Y3U8 105 aaKnown RBP21.16■□□□□ 0.98
NPLOC4-215ENST00000574095 IGKV1-12A0A0C4DH73 117 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 PSPNO60542 156 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 TSPAN9O75954 239 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 CLPXO76031 633 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 IGKV1D-12P01611 117 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 PEX2P28328 305 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 GRK1Q15835 563 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 LRRC75BQ2VPJ9 315 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 TCF23Q7RTU1 214 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 LHFPL4Q7Z7J7 247 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 OR5D18Q8NGL1 313 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 ZCCHC4Q9H5U6 513 aa21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 MRPS18AQ9NVS2 196 aaKnown RBP21.15■□□□□ 0.98
NPLOC4-215ENST00000574095 ZFPL1O95159 310 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 ZNF146Q15072 292 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 SMN1Q16637 294 aaKnown RBP21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 KLHL22Q53GT1 634 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 SLC35E4Q6ICL7 350 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 ZNF555Q8NEP9 628 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 OR4S1Q8NGB4 309 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 ZNF714Q96N38 554 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 PDCD1LG2Q9BQ51 273 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 HMG20AQ9NP66 347 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 SMPD3Q9NY59 655 aaPredicted RBP21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 GSTK1Q9Y2Q3 226 aa21.14■□□□□ 0.97
NPLOC4-215ENST00000574095 SIRPB1O00241 398 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 MT-ND2P03891 347 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 GBX2P52951 348 aaPredicted RBP21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 MEF2CQ06413 473 aaPredicted RBP21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 CRIP3Q6Q6R5 217 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 OR13D1Q8NGV5 346 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 OR5AK2Q8NH90 309 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 STMN2Q93045 179 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 GLS2Q9UI32 602 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 CMYA5Q8N3K9 4069 aa21.13■□□□□ 0.97
NPLOC4-215ENST00000574095 hADV38S2A0JD32 116 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 WBP4O75554 376 aaKnown RBP21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 ARG1P05089 322 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 IGHV1-8P0DP01 117 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 GTF2A1P52655 376 aaPredicted RBP21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 MRPL28Q13084 256 aaKnown RBP21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 ZSCAN26Q16670 478 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 SPIN3Q5JUX0 258 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 DYNAPQ8N1N2 210 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 COMMD4Q9H0A8 199 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 NEK6Q9HC98 313 aa21.12■□□□□ 0.97
NPLOC4-215ENST00000574095 FAM90A8PA6NJQ4 464 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 TMEM212A6NML5 194 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 KDM4BO94953 1096 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 CLIC3O95833 236 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 RBP4P02753 201 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 HCKP08631 526 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 CCDC159P0C7I6 412 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 LIMS3P0CW19 117 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 LIMS4P0CW20 117 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 OR3A1P47881 315 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 AANATQ16613 207 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 PLA1AQ53H76 456 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 LPCAT4Q643R3 524 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 SERPINA12Q8IW75 414 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 OR5D14Q8NGL3 314 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 PPP1R35Q8TAP8 253 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 PIFOQ8TCI5 191 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 TSEN15Q8WW01 171 aaKnown RBP21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 RDH12Q96NR8 316 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 FGF20Q9NP95 211 aaPredicted RBP21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 EXOSC4Q9NPD3 245 aaKnown RBP21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 DHDHQ9UQ10 334 aa21.11■□□□□ 0.97
NPLOC4-215ENST00000574095 SH2D1BO14796 132 aa21.1■□□□□ 0.97
NPLOC4-215ENST00000574095 MGST3O14880 152 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms