RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 GCM1Q9NP62 436 aa11.51□□□□□ -0.57
RPAIN-209ENST00000571558 SPATA2Q9UM82 520 aa11.51□□□□□ -0.57
RPAIN-209ENST00000571558 TMEM14DPA8MWL7 114 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 F8VVB4 439 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 F8VWA3 439 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 NOS1APO75052 506 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-209ENST00000571558 CLPXO76031 633 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 KDM4BO94953 1096 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 SFTPBP07988 381 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 IL2RGP31785 369 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 NPBWR2P48146 333 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 CAPZA1P52907 286 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 ZNF826PQ6ZT77 177 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 PEG10Q86TG7 708 aaKnown RBP11.5□□□□□ -0.57
RPAIN-209ENST00000571558 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 MKXQ8IYA7 352 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 TMEM104Q8NE00 496 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 OR51F2Q8NH61 342 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 ERGIC1Q969X5 290 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 SLAMF9Q96A28 289 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 SLC25A38Q96DW6 304 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 NRIP2Q9BQI9 281 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 MIXL1Q9H2W2 232 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 SMURF1Q9HCE7 757 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 UFSP2Q9NUQ7 469 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 C1orf123Q9NWV4 160 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 ING4Q9UNL4 249 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 POLDIP2Q9Y2S7 368 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 ETV7Q9Y603 341 aa11.5□□□□□ -0.57
RPAIN-209ENST00000571558 TMEM272A0A1B0GTI8 110 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 CTDSP2O14595 271 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 HPXP02790 462 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 TNFRSF1AP19438 455 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 BCL3P20749 454 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 RBMXP38159 391 aaKnown RBP11.49□□□□□ -0.57
RPAIN-209ENST00000571558 BMXP51813 675 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 EFNB2P52799 333 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 ELP2Q6IA86 826 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 OR10K2Q6IF99 312 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 SHISA2Q6UWI4 295 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 OR2W3Q7Z3T1 314 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 POC1AQ8NBT0 407 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 OR10K1Q8NGX5 313 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 ZNF671Q8TAW3 534 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 PTX4Q96A99 478 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 ZNF488Q96MN9 340 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 METTL9Q9H1A3 318 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 FN3KRPQ9HA64 309 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 SAP30LQ9HAJ7 183 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 HES4Q9HCC6 221 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 COMMD3Q9UBI1 195 aa11.49□□□□□ -0.57
RPAIN-209ENST00000571558 A0A1W2PP11 408 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 A6NLC8 198 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 LHBP01229 141 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 RAB6AP20340 208 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 RANBP1P43487 201 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 RSU1Q15404 277 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 SLC22A6Q4U2R8 563 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 MZT2AQ6P582 158 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 LAX1Q8IWV1 398 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 OR10Z1Q8NGY1 313 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 KCNG3Q8TAE7 436 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 CEP19Q96LK0 163 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 C6orf62Q9GZU0 229 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-209ENST00000571558 RHOFQ9HBH0 211 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 DECR2Q9NUI1 292 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 RBFOX1Q9NWB1 397 aaKnown RBP11.48□□□□□ -0.57
RPAIN-209ENST00000571558 PPP1R3CQ9UQK1 317 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 CACNG2Q9Y698 323 aa11.48□□□□□ -0.57
RPAIN-209ENST00000571558 TRAPPC2LH3BP13 241 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-209ENST00000571558 CDC14BO60729 498 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 HPGDSO60760 199 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 ZNF780AO75290 641 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-209ENST00000571558 CYB5AP00167 134 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-209ENST00000571558 GPR176Q14439 515 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 NHLRC3Q5JS37 347 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 GCSAMQ8N6F7 178 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 SAMD12Q8N8I0 201 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 OR6Q1Q8NGQ2 317 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 CMTM3Q96MX0 182 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 S100A13Q99584 98 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 ZNF747Q9BV97 191 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 CST11Q9H112 138 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 ABCG5Q9H222 651 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 HIF1ANQ9NWT6 349 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 RHBDL2Q9NX52 303 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 DCAF16Q9NXF7 216 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 RAB22AQ9UL26 194 aa11.47□□□□□ -0.57
RPAIN-209ENST00000571558 SRRM5B3KS81 715 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 WNT9BO14905 357 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 TMPRSS2O15393 492 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 TPD52L2O43399 206 aaKnown RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 AKR7A2O43488 359 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms