RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 UPK1BO75841 260 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TIAF1O95411 115 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 NUDT3O95989 172 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 IGHG4P01861 327 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CLPSP04118 112 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 HMGN2P05204 90 aaKnown RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 H2BFMP0C1H6 154 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 IRF2P14316 349 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CPMP14384 443 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 GABRA1P14867 456 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ARSBP15848 533 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 GATA1P15976 413 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 RAB6AP20340 208 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 MAOAP21397 527 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OMGP23515 440 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SSTR4P31391 388 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ETV6P41212 452 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 NBL1P41271 181 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 MAGEA5P43359 124 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 XCR1P46094 333 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OR1D4P47884 311 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 DAPP51397 102 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 PDX1P52945 283 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CDH11P55287 796 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CDH12P55289 794 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CLDN20P56880 219 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TMPRSS3P57727 454 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 RAB38P57729 211 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TCTAP57738 103 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ISL1P61371 349 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SELENOWP63302 87 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 HOXC5Q00444 222 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 PSG6Q00889 435 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OC90Q02509 493 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 ZNF616Q08AN1 781 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ZNF415Q09FC8 603 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 GAGE2BQ13066 116 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 MYBPHQ13203 477 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 IKZF1Q13422 519 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 NNATQ16517 81 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TAL2Q16559 108 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CTF1Q16619 201 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 PRSS8Q16651 343 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 DUSP5Q16690 384 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ZNF630Q2M218 657 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 CDNFQ49AH0 187 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 GAGE2EQ4V326 116 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 VWA2Q5GFL6 755 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TCTEX1D4Q5JR98 221 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 FHL5Q5TD97 284 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 FAM78BQ5VT40 261 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 C1orf189Q5VU69 101 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SAMD13Q5VXD3 122 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 DMKNQ6E0U4 476 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 XAF1Q6GPH4 301 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OR2T5Q6IEZ7 315 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 LAIR2Q6ISS4 152 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 GAGE2AQ6NT46 116 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 XKRXQ6PP77 449 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 PLET1Q6UQ28 207 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CASP12Q6UXS9 341 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 Q6ZSR3 168 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 P2RY8Q86VZ1 359 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SLC35F2Q8IXU6 374 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 LRRC25Q8N386 305 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 CADM2Q8N3J6 435 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 EID2Q8N6I1 236 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 STPG3Q8N7X2 389 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 BMPERQ8N8U9 685 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SLC16A11Q8NCK7 471 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 DMBX1Q8NFW5 382 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 KBTBD8Q8NFY9 601 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OR52N4Q8NGI2 321 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OR2T29Q8NH02 315 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OR1L3Q8NH93 324 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SFXN5Q8TD22 340 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ADAMTS17Q8TE56 1095 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 APOBEC4Q8WW27 367 aaKnown RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 GHSRQ92847 366 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TSLPQ969D9 159 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 CTHRC1Q96CG8 243 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 WDYHV1Q96HA8 205 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 KIRREL1Q96J84 757 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 BTF3L4Q96K17 158 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 OR10C1Q96KK4 312 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 COL21A1Q96P44 957 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ALKBH3Q96Q83 286 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 ATP5SQ99766 215 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ARHGDIGQ99819 225 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 RHNO1Q9BSD3 238 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 DOHHQ9BU89 302 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 SSBP4Q9BWG4 385 aaPredicted RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 NXF5Q9H1B4 397 aaKnown RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 C3orf14Q9HBI5 128 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 A4GALTQ9NPC4 353 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 RASL12Q9NYN1 266 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 IL36GQ9NZH8 169 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 KLRF1Q9NZS2 232 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 FLRT3Q9NZU0 649 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 DHCR7Q9UBM7 475 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms