RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PPIAL4FP0DN26 164 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 MUC1P15941 1255 aaPredicted RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 EGR1P18146 543 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 CFHR2P36980 270 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 MDH2P40926 338 aaKnown RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 MNDAP41218 407 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 GPR6P46095 362 aaPredicted RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 GABRA2P47869 451 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 NPBWR2P48146 333 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PITPNBP48739 271 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PTH2RP49190 550 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 VEGFCP49767 419 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PDLIM4P50479 330 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 BTG1P62324 171 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 UNC119Q13432 240 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 IL18Q14116 193 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 ARL6IP1Q15041 203 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 MPV17LQ2QL34 196 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PIGYQ3MUY2 71 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 SPRNQ5BIV9 151 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 ATAD3CQ5T2N8 411 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 ELP2Q6IA86 826 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR10K2Q6IF99 312 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 RAB12Q6IQ22 244 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 CDPF1Q6NVV7 123 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 ACP7Q6ZNF0 438 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 NLRC3Q7RTR2 1065 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 RNF144BQ7Z419 303 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 C1QL2Q7Z5L3 287 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 LYPD6Q86Y78 171 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 SPICQ8N5J4 248 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 GCSAMQ8N6F7 178 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 ASCC1Q8N9N2 400 aaKnown RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 CHST4Q8NCG5 386 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM104Q8NE00 496 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PPP1R35Q8TAP8 253 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 C15orf40Q8WUR7 153 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 NRGNQ92686 78 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLC25A28Q96A46 364 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PTX4Q96A99 478 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 RAB3CQ96E17 227 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 S100A16Q96FQ6 103 aaKnown RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 DIRAS2Q96HU8 199 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 CMTM3Q96MX0 182 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PIMREGQ9BSJ6 248 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 HMG20AQ9NP66 347 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 BEX4Q9NWD9 120 aaPredicted RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 EXTL2Q9UBQ6 330 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FBLN5Q9UBX5 448 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PCDHB10Q9UN67 800 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 WIPI2Q9Y4P8 454 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PPIAL4AQ9Y536 164 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 CACNG2Q9Y698 323 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 IGHV3OR15-7A0A075B7D8 119 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A0A6YYH2 397 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A1W2PP11 408 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 A6NJ64 397 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR2AT4A6NND4 320 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 OVOL3O00110 214 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 NDUFS8O00217 210 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 SIRPB1O00241 398 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 HSPB6O14558 160 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 GEMIN2O14893 280 aaKnown RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 WNT9BO14905 357 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 DEGS1O15121 323 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 PDCD6O75340 191 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 LY6HO94772 140 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 HAND1O96004 215 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 IGHV4-39P01824 125 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 EIF4EP06730 217 aaKnown RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 HEXAP06865 529 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 CHRM2P08172 466 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 ACAA1P09110 424 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 CD37P11049 281 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 BLVRBP30043 206 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 NR4A2P43354 598 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 EFNB2P52799 333 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 DSCR9P59020 149 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 ERVK11-1P61568 191 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 SCN1BQ07699 218 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 RBM39Q14498 530 aaKnown RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 TAF9Q16594 264 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 DEFB113Q30KQ7 82 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 PAN3Q58A45 887 aaKnown RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 NHLRC3Q5JS37 347 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 AVPI1Q5T686 147 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 SFRP4Q6FHJ7 346 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 CNIH2Q6PI25 160 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 CRIP3Q6Q6R5 217 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM131AQ6UXB0 335 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 ASCL4Q6XD76 172 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLC36A1Q7Z2H8 476 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF525Q8N782 197 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 DEFB108BQ8NET1 73 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM185AQ8NFB2 350 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR5H6Q8NGV6 325 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 S100ZQ8WXG8 99 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM168AQ92567 244 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms