RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139	FUT6	P51993	359 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	VBP1	P61758	197 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	NCS1	P62166	190 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	RPS25	P62851	125 aa	Known RBP	5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	HIST1H3A	P68431	136 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	TGFBR3	Q03167	851 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	DYNC1I2	Q13409	638 aa	Known RBP	5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	RAB35	Q15286	201 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ETFDH	Q16134	617 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	SLC36A2	Q495M3	483 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ACSF3	Q4G176	576 aa	Predicted RBP	5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	HIST2H3PS2	Q5TEC6	136 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	TMEM244	Q5VVB8	128 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ARL9	Q6T311	187 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	HIST2H3A	Q71DI3	136 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	SLC22A24	Q8N4F4	322 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	RFLNB	Q8N5W9	214 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	NRAC	Q8N912	160 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	DYNC2LI1	Q8TCX1	351 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	GPR148	Q8TDV2	347 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	CHPT1	Q8WUD6	406 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	S100Z	Q8WXG8	99 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	GHSR	Q92847	366 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	SPTSSA	Q969W0	71 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	PINX1	Q96BK5	328 aa	Known RBP	5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	PGLYRP3	Q96LB9	341 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ALKBH3	Q96Q83	286 aa	Predicted RBP	5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ATF6B	Q99941	703 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	DCUN1D5	Q9BTE7	237 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	TMED9	Q9BVK6	235 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	SLITRK2	Q9H156	845 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ELOVL3	Q9HB03	270 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	YAE1D1	Q9NRH1	226 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	ZNF391	Q9UJN7	358 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	FBXL3	Q9UKT7	428 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	LHFPL6	Q9Y693	200 aa		5.99	□□□□□ -1.45
CNOT1-222	ENST00000570139	IGLV5-45	A0A087WSX0	123 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	IGKV1D-43	A0A0B4J1Z2	117 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	TRAV1-2	A0A0B4J238	106 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139		A0A1B0GTH9	108 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ANKRD30BL	A7E2S9	258 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	LOC110117498-PIK3R3	F6TDL0	507 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	LGALS8	O00214	317 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	PDCD5	O14737	125 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ARPC1B	O15143	372 aa	Known RBP	5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	LANCL1	O43813	399 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	GPX5	O75715	221 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	UBL3	O95164	117 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	CD2	P06729	351 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	UCHL1	P09936	223 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	COX5B	P10606	129 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	KLK2	P20151	261 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	PRDX2	P32119	198 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	TIMP3	P35625	211 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ARR3	P36575	388 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	PSMD7	P51665	324 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	HCCS	P53701	268 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	LSM3	P62310	102 aa	Known RBP	5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	FABP5	Q01469	135 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	KLRB1	Q12918	225 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	SPCS2	Q15005	226 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	GUSBP1	Q15486	140 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	SGCA	Q16586	387 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	CEACAM16	Q2WEN9	425 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ZNF404	Q494X3	552 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139		Q499Y3	187 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	BCL2L15	Q5TBC7	163 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	FBXW9	Q5XUX1	488 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	C22orf42	Q6IC83	251 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	DHRS11	Q6UWP2	260 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	LRRN1	Q6UXK5	716 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	CATSPERD	Q86XM0	798 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	WDFY1	Q8IWB7	410 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ZNF676	Q8N7Q3	588 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	OR2G2	Q8NGZ5	317 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	NDNF	Q8TB73	568 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	FAM57A	Q8TBR7	257 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ACOT12	Q8WYK0	555 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	RPL3L	Q92901	407 aa	Known RBP	5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	SLC25A46	Q96AG3	418 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	ZNF48	Q96MX3	618 aa	Predicted RBP	5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	NXF2	Q9GZY0	626 aa	Known RBP	5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	PLEK2	Q9NYT0	353 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	CKLF	Q9UBR5	152 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	NUFIP1	Q9UHK0	495 aa	Known RBP	5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	KLHDC2	Q9Y2U9	406 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139	TIMM10B	Q9Y5J6	103 aa		5.98	□□□□□ -1.45
CNOT1-222	ENST00000570139		A0A075B6Q4	140 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	TRBV5-5	A0A0J9YX44	114 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	PNMA8C	A0A1B0GUJ8	204 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	IQCM	A0A1B0GVH7	501 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	TMEM269	A0A1B0GVZ9	245 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	OR6C6	A6NF89	314 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	OR4C45	A6NMZ5	311 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	DHRS7C	A6NNS2	312 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	CASK	O14936	926 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	SGCE	O43556	437 aa		5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	SRSF10	O75494	262 aa	Known RBP	5.97	□□□□□ -1.45
CNOT1-222	ENST00000570139	RPP14	O95059	124 aa	Known RBP	5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms