RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CDC14CA4D256 554 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 GCM2O75603 506 aaPredicted RBP6.34□□□□□ -1.4
CNOT1-216ENST00000569240 AKR7A3O95154 331 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 ARSAP15289 507 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 HHEXQ03014 270 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.4
CNOT1-216ENST00000569240 LYSMD4Q5XG99 296 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 OR2Y1Q8NGV0 311 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM56Q96MV1 263 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 PLAC1Q9HBJ0 212 aa6.34□□□□□ -1.4
CNOT1-216ENST00000569240 TRBV5-5A0A0J9YX44 114 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 GPR37O15354 613 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 S1PR2O95136 353 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 NXPH2O95156 264 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 SEMA4FO95754 770 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 GABRA6Q16445 453 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 KCNMB1Q16558 191 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 OR5D13Q8NGL4 314 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 MRPL38Q96DV4 380 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 GAS2L1Q99501 681 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 CDX2Q99626 313 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 MRPL37Q9BZE1 423 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 CHST5Q9GZS9 411 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 INSL6Q9Y581 213 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PLCH1Q4KWH8 1693 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 A0A0A6YYD5 115 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 DHRS3O75911 302 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 NNATQ16517 81 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 MARS2Q96GW9 593 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ULBP3Q9BZM4 244 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 MRPL33O75394 65 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ZIC2O95409 532 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 VSIG10L2P0DP72 767 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 AGFG1P52594 562 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 JAG1P78504 1218 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 DOLPP1Q86YN1 238 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 CYB561D1Q8N8Q1 229 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 SDHCQ99643 169 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PPIL1Q9Y3C6 166 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 TNRC6CQ9HCJ0 1690 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 TRAV30A0A087WSZ9 112 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 H3BNC9 293 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 UCP3P55916 312 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 RPS20P60866 119 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 SP3Q02447 781 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PLPP4Q5VZY2 271 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 POC1AQ8NBT0 407 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 CPEB3Q8NE35 698 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 CD99L2Q8TCZ2 262 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 GRAMD2BQ96HH9 432 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 SOSTQ9BQB4 213 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PARLQ9H300 379 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 WBP1LQ9NX94 342 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PISDQ9UG56 409 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 RABAC1Q9UI14 185 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 NTNG1Q9Y2I2 539 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 STARD10Q9Y365 291 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 SF3B6Q9Y3B4 125 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 LTBP3Q9NS15 1303 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 HELTA6NFD8 242 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 NKX6-3A6NJ46 265 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 F8VVB4 439 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 F8VWA3 439 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PRKRAO75569 313 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ANKRD34CP0C6C1 535 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 CA7P43166 264 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 C1orf194Q5T5A4 169 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PARS2Q7L3T8 475 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 FAM169BQ8N8A8 192 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 RAB37Q96AX2 223 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM45BQ96B21 275 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ICAM5Q9UMF0 924 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 TBL2Q9Y4P3 447 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 A0A1B0GWJ7 208 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 MEX3AA1L020 520 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 PRAMEF26H0Y7S4 382 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 H0YIG0 161 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ADAM20O43506 726 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 LBX1P52954 281 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 RPS23P62266 143 aaKnown RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 OR4X2Q8NGF9 303 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ADAT3Q96EY9 351 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 GPX7Q96SL4 187 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-216ENST00000569240 MMP25Q9NPA2 562 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ST6GALNAC2Q9UJ37 374 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 ST3GAL6Q9Y274 331 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 VSIG4Q9Y279 399 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 LRP12Q9Y561 859 aa6.33□□□□□ -1.4
CNOT1-216ENST00000569240 A0A1W2PR48 441 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 FRG2CA6NGY1 282 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 LRRC3CA6NJW4 275 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TNFSF13O75888 250 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 AMY1AP04745 511 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TYMSP04818 313 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 LIMS1P48059 325 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF141Q15928 474 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 C19orf47Q8N9M1 422 aaKnown RBP6.32□□□□□ -1.4
CNOT1-216ENST00000569240 PIGTQ969N2 578 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 COMMD5Q9GZQ3 224 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms