RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 TMBIM4Q9HC24 238 aa4.14□□□□□ -1.75
KARS-208ENST00000566772 ISYNA1Q9NPH2 558 aa4.14□□□□□ -1.75
KARS-208ENST00000566772 PSG8Q9UQ74 426 aa4.14□□□□□ -1.75
KARS-208ENST00000566772 SMG1Q96Q15 3661 aaKnown RBP4.14□□□□□ -1.75
KARS-208ENST00000566772 PTPRBP23467 1997 aa4.14□□□□□ -1.75
KARS-208ENST00000566772 MYH10P35580 1976 aa4.14□□□□□ -1.75
KARS-208ENST00000566772 APC2O95996 2303 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 ACACAQ13085 2346 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 TMEM131Q92545 1883 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 TP53BP1Q12888 1972 aaPredicted RBP4.13□□□□□ -1.75
KARS-208ENST00000566772 MUC22E2RYF6 1773 aaPredicted RBP4.13□□□□□ -1.75
KARS-208ENST00000566772 C1orf232A0A0U1RR37 186 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 ZNF233A6NK53 670 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 M0QXV9 152 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 GATCO43716 136 aaKnown RBP4.13□□□□□ -1.75
KARS-208ENST00000566772 CTNSO60931 367 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 TNFAIP8O95379 198 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 ACTL6AO96019 429 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 GLAP06280 429 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 HLA-EP13747 358 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 CD1EP15812 388 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 MAGEA3P43357 314 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 CAV2P51636 162 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 NDUFA8P51970 172 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 RGNQ15493 299 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 SNRNP35Q16560 246 aaKnown RBP4.13□□□□□ -1.75
KARS-208ENST00000566772 CHRFAM7AQ494W8 412 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 Q6ZTC4 211 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 AHSA2Q719I0 299 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 BHLHA15Q7RTS1 189 aaPredicted RBP4.13□□□□□ -1.75
KARS-208ENST00000566772 FAM19A1Q7Z5A9 133 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 SLC30A8Q8IWU4 369 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 CA13Q8N1Q1 262 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 FAM71E2Q8N5Q1 922 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 OR5B17Q8NGF7 314 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 OTUB2Q96DC9 234 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 GALNT14Q96FL9 552 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 SMARCD1Q96GM5 515 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 FAM49BQ9NUQ9 324 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 UVRAGQ9P2Y5 699 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 CFL2Q9Y281 166 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 ZNF257Q9Y2Q1 563 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 ACOT9Q9Y305 439 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 FADS3Q9Y5Q0 445 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 HECTD1Q9ULT8 2610 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 CELSR3Q9NYQ7 3312 aa4.13□□□□□ -1.75
KARS-208ENST00000566772 IGHV2OR16-5A0A0B4J2B6 119 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 EMC8O43402 210 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 BCL2L11O43521 198 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 CDC40O60508 579 aaKnown RBP eCLIP4.12□□□□□ -1.75
KARS-208ENST00000566772 CD3GP09693 182 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 GGT2P36268 569 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 RGS6P49758 472 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 P2RX1P51575 399 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 XKP51811 444 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 MYL6P60660 151 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 PIGHQ14442 188 aaPredicted RBP4.12□□□□□ -1.75
KARS-208ENST00000566772 CAPRIN1Q14444 709 aaKnown RBP4.12□□□□□ -1.75
KARS-208ENST00000566772 MAPRE2Q15555 327 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 OR4D1Q15615 310 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 PIGGQ5H8A4 983 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 METTL21CQ5VZV1 264 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 NCCRP1Q6ZVX7 275 aaPredicted RBP4.12□□□□□ -1.75
KARS-208ENST00000566772 ATPAF2Q8N5M1 289 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 OR11H7Q8NGC8 314 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 OR10Z1Q8NGY1 313 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 TNFRSF14Q92956 283 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 SEH1LQ96EE3 360 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 C20orf144Q9BQM9 153 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 OR51B5Q9H339 312 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 MED4Q9NPJ6 270 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 IFT46Q9NQC8 304 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 RHBDL2Q9NX52 303 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 PUS1Q9Y606 427 aaKnown RBP eCLIP4.12□□□□□ -1.75
KARS-208ENST00000566772 PLXNB3Q9ULL4 1909 aa4.12□□□□□ -1.75
KARS-208ENST00000566772 MYO18AQ92614 2054 aaKnown RBP4.11□□□□□ -1.75
KARS-208ENST00000566772 PCNX2A6NKB5 2137 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 E7ENQ6 273 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 SUPT3HO75486 399 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 MYL9P24844 172 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 KDELR2P33947 212 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 CTRLP40313 264 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 STX17P56962 302 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 NUP107P57740 925 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 IGLV3-21P80748 117 aaPredicted RBP4.11□□□□□ -1.75
KARS-208ENST00000566772 STX4Q12846 297 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 PSG5Q15238 335 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 GUSBP1Q15486 140 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 ARL9Q6T311 187 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 COX15Q7KZN9 410 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 LRRC6Q86X45 466 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 COX18Q8N8Q8 333 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 FAM222BQ8WU58 562 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 LRRC45Q96CN5 670 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 WFIKKN1Q96NZ8 548 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 C7orf50Q9BRJ6 194 aaKnown RBP4.11□□□□□ -1.75
KARS-208ENST00000566772 SLC25A2Q9BXI2 301 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 SRRQ9GZT4 340 aa4.11□□□□□ -1.75
KARS-208ENST00000566772 LHX5Q9H2C1 402 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms