RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 M6PRP20645 277 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RPL12P30050 165 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RPS9P46781 194 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 OMPP47874 163 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 GCLMP48507 274 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CYB561P49447 251 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 P2RY4P51582 365 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 ERVS71-1P61550 626 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 HBG1P69891 147 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 HBG2P69892 147 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 PPIDQ08752 370 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SRSF6Q13247 344 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 HERPUD1Q15011 391 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CEACAM16Q2WEN9 425 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TMEM176BQ3YBM2 270 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CHRFAM7AQ494W8 412 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 C6orf99Q4VX62 202 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 AKIRIN2Q53H80 203 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SPIN3Q5JUX0 258 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CLEC12AQ5QGZ9 265 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM182AQ5T1J6 154 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 AVPI1Q5T686 147 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 MARC1Q5VT66 337 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TMEM236Q5W0B7 351 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 KDM4DQ6B0I6 523 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CD200R1LQ6Q8B3 271 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CLEC19AQ6UXS0 136 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FBXW12Q6X9E4 464 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 DGAT2L6Q6ZPD8 337 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RTL4Q6ZR62 310 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RASSF6Q6ZTQ3 369 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM231DQ6ZW35 169 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 NT5DC3Q86UY8 548 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 COMMD7Q86VX2 200 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 PRSS58Q8IYP2 241 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RXFP4Q8TDU9 374 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CASTOR1Q8WTX7 329 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM222BQ8WU58 562 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 AP3S1Q92572 193 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TLCD1Q96CP7 247 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SMIM12Q96EX1 92 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 GALNT14Q96FL9 552 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RNF185Q96GF1 192 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FMC1Q96HJ9 113 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RILPQ96NA2 401 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 QKIQ96PU8 341 aaKnown RBP eCLIP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 PITX2Q99697 317 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 OPRPNQ99935 248 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 OR11A1Q9GZK7 315 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC25A31Q9H0C2 315 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TPK1Q9H3S4 243 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM49BQ9NUQ9 324 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 DMAC2Q9NW81 257 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 FKBP14Q9NWM8 211 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 GID8Q9NWU2 228 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF226Q9NYT6 803 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 SIGLEC7Q9Y286 467 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TRAPPC4Q9Y296 219 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 ENPP4Q9Y6X5 453 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 PZPP20742 1482 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 GOLGA3Q08378 1498 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 RPRD2Q5VT52 1461 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TNRC6CQ9HCJ0 1690 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 WRNQ14191 1432 aaPredicted RBP eCLIP2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 TNRQ92752 1358 aa2.49□□□□□ -2.01
HERPUD1-211ENST00000566550 ASXL1Q8IXJ9 1541 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 PXDNLA1KZ92 1463 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 IGKV2D-30A0A075B6S6 120 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 A0A0G2JN53 185 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CYSRT1A8MQ03 144 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 NDUFC2-KCTD14E9PQ53 114 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 DENRO43583 198 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 SYNGR1O43759 233 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM189A1O60320 539 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 UGT2B11O75310 529 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 DCTN3O75935 186 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CNIH1O95406 144 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 KRT75O95678 551 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 IGHV3-23P01764 117 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 BGLAPP02818 100 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CFC1BP0CG36 223 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CFC1P0CG37 223 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 PSMB1P20618 241 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 SLCO1A2P46721 670 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CCL23P55773 120 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 OR4D2P58180 307 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 TIMM10P62072 90 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ARF6P62330 175 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CCL7P80098 99 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 BAXQ07812 192 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 GINS1Q14691 196 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC9A3R2Q15599 337 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 TOMM34Q15785 309 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 GUK1Q16774 197 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 HES5Q5TA89 166 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ARL9Q6T311 187 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 UBALD2Q8IYN6 164 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms