RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TSPAN9O75954 239 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 CLPXO76031 633 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 ZFPL1O95159 310 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 HAND1O96004 215 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 LIMS3P0CW19 117 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 LIMS4P0CW20 117 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 ZNF20P17024 532 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 PRKACBP22694 351 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 COX7A1P24310 79 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 ACTA2P62736 377 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 ACTG2P63267 376 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 RAB40BQ12829 278 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 PDZK1IP1Q13113 114 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 ZNF146Q15072 292 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 DHRS7BQ6IAN0 325 aaPredicted RBP11.89□□□□□ -0.51
FANCA-220ENST00000566409 TREML4Q6UXN2 200 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 LHFPL4Q7Z7J7 247 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 FAM58AQ8N1B3 248 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 SNX22Q96L94 193 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 Q96MT0 163 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 OPALINQ96PE5 141 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 TGP01266 2768 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 BTBD17A6NE02 478 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 MPZL2O60487 215 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 BAG2O95816 211 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 FADS2O95864 444 aaKnown RBP11.88□□□□□ -0.51
FANCA-220ENST00000566409 MT-ND2P03891 347 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 ZNF728P0DKX0 622 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 TGFBR2P37173 567 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 EDDM3BP56851 147 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 LY6EQ16553 131 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 SLC35E4Q6ICL7 350 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 LHFPL2Q6ZUX7 228 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 Q8IYB0 196 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 ZNF676Q8N7Q3 588 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 OR4S1Q8NGB4 309 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 OR13C9Q8NGT0 318 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 PDCD1LG2Q9BQ51 273 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 CHST6Q9GZX3 395 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 PPA2Q9H2U2 334 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 HMG20AQ9NP66 347 aa11.88□□□□□ -0.51
FANCA-220ENST00000566409 hCG_1809904A0A1W2PP81 198 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 A0A1W2PPE2 198 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 A0A1W2PR64 198 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 A0A1W2PRV1 198 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 ODF3BA8MYP8 253 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 IGHV1-8P0DP01 117 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 PRKACAP17612 351 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 OR3A1P47881 315 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 GTF2A1P52655 376 aaPredicted RBP11.87□□□□□ -0.51
FANCA-220ENST00000566409 SNU13P55769 128 aaKnown RBP11.87□□□□□ -0.51
FANCA-220ENST00000566409 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 LRRC75BQ2VPJ9 315 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 GDPD3Q7L5L3 318 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 OR5D18Q8NGL1 313 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 RGP1Q92546 391 aaPredicted RBP11.87□□□□□ -0.51
FANCA-220ENST00000566409 ZCCHC4Q9H5U6 513 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 INPP5EQ9NRR6 644 aa11.87□□□□□ -0.51
FANCA-220ENST00000566409 SMPD3Q9NY59 655 aaPredicted RBP11.87□□□□□ -0.51
FANCA-220ENST00000566409 RPL36Q9Y3U8 105 aaKnown RBP11.87□□□□□ -0.51
FANCA-220ENST00000566409 WIPF1O43516 503 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 CHST1O43916 411 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 MMP23AO75900 390 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 KDM4BO94953 1096 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 CLIC3O95833 236 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 RBP4P02753 201 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 GABRR1P24046 479 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 ZP1P60852 638 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 MEF2CQ06413 473 aaPredicted RBP11.86□□□□□ -0.51
FANCA-220ENST00000566409 GRK1Q15835 563 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 AANATQ16613 207 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 LPCAT4Q643R3 524 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 XAF1Q6GPH4 301 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 OR11H6Q8NGC7 330 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 FGF20Q9NP95 211 aaPredicted RBP11.86□□□□□ -0.51
FANCA-220ENST00000566409 GSTK1Q9Y2Q3 226 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 SIGLEC9Q9Y336 463 aa11.86□□□□□ -0.51
FANCA-220ENST00000566409 hADV38S2A0JD32 116 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 TMEM212A6NML5 194 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 SIRPB1O00241 398 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 ALX3O95076 343 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 OR2H2O95918 312 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 CYB5AP00167 134 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 LMO1P25800 156 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 PEX2P28328 305 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 ETV1P50549 477 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 RAB13P51153 203 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 LGALS4P56470 323 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 IL18R1Q13478 541 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 KLHL22Q53GT1 634 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 ZNF626Q68DY1 528 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms