RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 FARSAQ9Y285 508 aaKnown RBP3.12□□□□□ -1.91
CNOT1-209ENST00000566240 DDX60Q8IY21 1712 aaKnown RBP3.12□□□□□ -1.91
CNOT1-209ENST00000566240 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.12□□□□□ -1.91
CNOT1-209ENST00000566240 TOGARAM1Q9Y4F4 1720 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 LAMB2P55268 1798 aa3.12□□□□□ -1.91
CNOT1-209ENST00000566240 KDM6AO15550 1401 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 CCL15-CCL14A0A0B4J2E2 113 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 SLC5A10A0PJK1 596 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 IGLV2-8P01709 118 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 IGLV3-25P01717 112 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 CISD3P0C7P0 127 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 HSPD1P10809 573 aaKnown RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 DSTNP60981 165 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 STX4Q12846 297 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 ANGPT1Q15389 498 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 CCL15Q16663 113 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 CDNFQ49AH0 187 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 LINC00483Q53H64 154 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 TTC32Q5I0X7 151 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 SYT6Q5T7P8 510 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 RESP18Q5W5W9 173 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 AP1ARQ63HQ0 302 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 SSX6Q7RTT6 188 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 FAM19A1Q7Z5A9 133 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 NELFCDQ8IXH7 590 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 ZCCHC24Q8N2G6 241 aaKnown RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 OR1L1Q8NH94 360 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 LINC01560Q8TB33 94 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 NT5CQ8TCD5 201 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 SFXN5Q8TD22 340 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 DOK4Q8TEW6 326 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 CDX2Q99626 313 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 SDHCQ99643 169 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 PDCD1LG2Q9BQ51 273 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 TBL1YQ9BQ87 522 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 OR52A5Q9H2C5 316 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 PRORYQ9H606 182 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 WDR55Q9H6Y2 383 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 DDIT4Q9NX09 232 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 ORC6Q9Y5N6 252 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 CICQ96RK0 1608 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 MYH7P12883 1935 aa3.11□□□□□ -1.91
CNOT1-209ENST00000566240 IBTKQ9P2D0 1353 aaPredicted RBP3.11□□□□□ -1.91
CNOT1-209ENST00000566240 TJP1Q07157 1748 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 BCORQ6W2J9 1755 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 IQCF5A8MTL0 148 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 NDUFS5O43920 106 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 PLIN3O60664 434 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 GATBO75879 557 aaKnown RBP3.1□□□□□ -1.91
CNOT1-209ENST00000566240 CD8AP01732 235 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 LINC00869P0C866 280 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 OR12D2P58182 307 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 UBE2KP61086 200 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 GUSBP1Q15486 140 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 TOMM34Q15785 309 aaPredicted RBP3.1□□□□□ -1.91
CNOT1-209ENST00000566240 TEX30Q5JUR7 227 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 FAM71E1Q6IPT2 247 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 BHLHA15Q7RTS1 189 aaPredicted RBP3.1□□□□□ -1.91
CNOT1-209ENST00000566240 ERO1BQ86YB8 467 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 OR4M2Q8NGB6 313 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 OR2L8Q8NGY9 312 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 MRPL48Q96GC5 212 aaKnown RBP3.1□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF75AQ96N20 296 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 VAT1Q99536 393 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 TMED9Q9BVK6 235 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 NUDT9Q9BW91 350 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 SLC38A1Q9H2H9 487 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 PLEKHA1Q9HB21 404 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 ENOPH1Q9UHY7 261 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 LRRC42Q9Y546 428 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 GMEB1Q9Y692 573 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 MYH13Q9UKX3 1938 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 RAD50Q92878 1312 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 SCN7AQ01118 1682 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF831Q5JPB2 1677 aa3.1□□□□□ -1.91
CNOT1-209ENST00000566240 KCPQ6ZWJ8 1503 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 NHSQ6T4R5 1651 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 IGHV6-1A0A0B4J1U7 121 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 F8VP50 259 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 CCNE2O96020 404 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 IGKV1D-16P01601 117 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 HLA-DQB1P01920 261 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 CD74P04233 296 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 GIMD1P0DJR0 217 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 PSMB5P28074 263 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 PSMB2P49721 201 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 LAMTOR4Q0VGL1 99 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 ZNF695Q8IW36 515 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 SLC25A46Q96AG3 418 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 L3HYPDHQ96EM0 354 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 LINC00167Q96N53 147 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 ACBD6Q9BR61 282 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 SPACA1Q9HBV2 294 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 TMBIM4Q9HC24 238 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 C12orf4Q9NQ89 552 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 CYB5R1Q9UHQ9 305 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 ANXA10Q9UJ72 324 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 RFNGQ9Y644 331 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 ARAP2Q8WZ64 1704 aa3.09□□□□□ -1.91
CNOT1-209ENST00000566240 NUP98P52948 1817 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms