RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 FRRS1LQ9P0K9 344 aa19.14■□□□□ 0.65
RAB40C-209ENST00000565511 TBL2Q9Y4P3 447 aaKnown RBP19.14■□□□□ 0.65
RAB40C-209ENST00000565511 IGKV1-12A0A0C4DH73 117 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 G3V4G9 280 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 IGKV1D-12P01611 117 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 ALPLP05186 524 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 OR3A1P47881 315 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 LIAT1Q6ZQX7 453 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 FAM220AQ7Z4H9 259 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 OR13D1Q8NGV5 346 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 FGGYQ96C11 551 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 RNFT2Q96EX2 444 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 RAB18Q9NP72 206 aa19.13■□□□□ 0.65
RAB40C-209ENST00000565511 TRBV2A0A0J9YWF9 115 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 H3BNX3 289 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 EI24O14681 340 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 ATF1P18846 271 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 AZGP1P25311 298 aaKnown RBP19.12■□□□□ 0.65
RAB40C-209ENST00000565511 RASSF2P50749 326 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 CDC42P60953 191 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 CNN3Q15417 329 aaKnown RBP19.12■□□□□ 0.65
RAB40C-209ENST00000565511 GRK1Q15835 563 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 ZIK1Q3SY52 487 aaPredicted RBP19.12■□□□□ 0.65
RAB40C-209ENST00000565511 Q8N2B8 174 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 CCDC54Q8NEL0 328 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 DNAAF1Q8NEP3 725 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 PP6455Q8WZ26 134 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 RFKQ969G6 155 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 SPACA5Q96QH8 159 aa19.12■□□□□ 0.65
RAB40C-209ENST00000565511 ATP5HO75947 161 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 PRKACAP17612 351 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 GABRR1P24046 479 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 RBP2P50120 134 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 ACTA2P62736 377 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 ACTG2P63267 376 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 ACTC1P68032 377 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 ACTA1P68133 377 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 MEF2CQ06413 473 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-209ENST00000565511 DYNC1I2Q13409 638 aaKnown RBP19.11■□□□□ 0.65
RAB40C-209ENST00000565511 TMEM95Q3KNT9 176 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 FBLN7Q53RD9 439 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 FDX2Q6P4F2 183 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 UTS2BQ765I0 119 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 FAM58AQ8N1B3 248 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 WIPF2Q8TF74 440 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-209ENST00000565511 FOXRED1Q96CU9 486 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-209ENST00000565511 C10orf35Q96D05 121 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 HRASLS5Q96KN8 279 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 MBOAT4Q96T53 435 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 CDCA4Q9BXL8 241 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 SEBOXQ9HB31 216 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-209ENST00000565511 HILPDAQ9Y5L2 63 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 LINC00312Q9Y6C7 94 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 SESN1Q9Y6P5 492 aa19.11■□□□□ 0.65
RAB40C-209ENST00000565511 IGHV2-26A0A0B4J1V2 119 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 SIRPB1O00241 398 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 SLC16A6O15403 523 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 CD28P10747 220 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 GDNFP39905 211 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 ATP1B3P54709 279 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 MTCP1P56278 107 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 ZNF146Q15072 292 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 BEAN1Q3B7T3 259 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 C11orf88Q6PI97 169 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 RPS4Y2Q8TD47 263 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 MALSU1Q96EH3 234 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 PELI1Q96FA3 418 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 IMPAD1Q9NX62 359 aa19.1■□□□□ 0.65
RAB40C-209ENST00000565511 hADV38S2A0JD32 116 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 ADARB2-AS1A8MUL3 147 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 CIB2O75838 187 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 SERPINA3P01011 423 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 OPN1MWP04001 364 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 OPN1MW2P0DN77 364 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 OPN1MW3P0DN78 364 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 PEX2P28328 305 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 SNRPGP62308 76 aaKnown RBP19.09■□□□□ 0.65
RAB40C-209ENST00000565511 PDZK1IP1Q13113 114 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 TMEM244Q5VVB8 128 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 ZNF676Q8N7Q3 588 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 OR5D18Q8NGL1 313 aa19.09■□□□□ 0.65
RAB40C-209ENST00000565511 DAPL1A0PJW8 107 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 OR4C45A6NMZ5 311 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 PRB2P02812 416 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-209ENST00000565511 ISG15P05161 165 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 ZNF20P17024 532 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 P2RX3P56373 397 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 SLC25A30Q5SVS4 291 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 UTF1Q5T230 341 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 PRAMEF5Q5TYX0 476 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 Q8IYB0 196 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 OR13C9Q8NGT0 318 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 LGALS12Q96DT0 336 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 C4orf36Q96KX1 117 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 OPALINQ96PE5 141 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 TMEM133Q9H2Q1 129 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 HMG20AQ9NP66 347 aa19.08■□□□□ 0.64
RAB40C-209ENST00000565511 OR2H2O95918 312 aa19.07■□□□□ 0.64
RAB40C-209ENST00000565511 HTR1AP08908 422 aa19.07■□□□□ 0.64
RAB40C-209ENST00000565511 GABRB1P18505 474 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms