RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 IMPA1P29218 277 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 RANBP1P43487 201 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 C2orf80Q0P641 193 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 VAMP3Q15836 100 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 TNXAQ16473 311 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 TMEM241Q24JQ0 296 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 ACTBL2Q562R1 376 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 ZFAND6Q6FIF0 208 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 ZNF773Q6PK81 442 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 FAM19A1Q7Z5A9 133 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 NT5DC3Q86UY8 548 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 OR51Q1Q8NH59 317 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 LGALS14Q8TCE9 139 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 YIPF5Q969M3 257 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 TVP23CQ96ET8 276 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 ZBED3Q96IU2 234 aaPredicted RBP2.18□□□□□ -2.06
CHD9-215ENST00000565442 ZNF396Q96N95 335 aaPredicted RBP2.18□□□□□ -2.06
CHD9-215ENST00000565442 OR2V2Q96R30 315 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 CIB1Q99828 191 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 SIKE1Q9BRV8 207 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 NLE1Q9NVX2 485 aaPredicted RBP2.18□□□□□ -2.06
CHD9-215ENST00000565442 TAS2R1Q9NYW7 299 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 R4GN34 69 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 NID2Q14112 1375 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 MGAT4DA6NG13 374 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 BOLA2-SMG1P6H3BVE0 249 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 COX7A2P2O60397 106 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 P0C880 135 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 M6PRP20645 277 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 HTR2BP41595 481 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 XKP51811 444 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 KLF3P57682 345 aaPredicted RBP2.17□□□□□ -2.06
CHD9-215ENST00000565442 TNNC1P63316 161 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 GPR176Q14439 515 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 DEFB134Q4QY38 66 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 ATP6AP1LQ52LC2 224 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 UBE2NLQ5JXB2 153 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 MRPL2Q5T653 305 aaKnown RBP2.17□□□□□ -2.06
CHD9-215ENST00000565442 ZNF660Q6AZW8 331 aaPredicted RBP2.17□□□□□ -2.06
CHD9-215ENST00000565442 CLEC18BQ6UXF7 455 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 CYP4Z1Q86W10 505 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 ZNF664Q8N3J9 261 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 OR6K3Q8NGY3 331 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 OR8S1Q8NH09 359 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 LRRC20Q8TCA0 184 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 BLNKQ8WV28 456 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 OTUB2Q96DC9 234 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 FMC1Q96HJ9 113 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 NXF2Q9GZY0 626 aaKnown RBP2.17□□□□□ -2.06
CHD9-215ENST00000565442 RMND1Q9NWS8 449 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 RBM12B-AS1Q9P1G2 102 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 CLEC2DQ9UHP7 191 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 DYSFO75923 2080 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 MIA3Q5JRA6 1907 aa2.17□□□□□ -2.06
CHD9-215ENST00000565442 BAZ1BQ9UIG0 1483 aaKnown RBP2.16□□□□□ -2.06
CHD9-215ENST00000565442 IGKV1OR2-108A0A075B7D4 117 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 RBFOX3A6NFN3 312 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 C4orf51C9J302 202 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 hCG_2039718K7EN88 272 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 K7EPK0 472 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 PSMD11O00231 422 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 ISLRO14498 428 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 ZMPSTE24O75844 475 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 S100A9P06702 114 aaKnown RBP2.16□□□□□ -2.06
CHD9-215ENST00000565442 DNASE1L1P49184 302 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 CCL23P55773 120 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 IHHQ14623 411 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 TAF9Q16594 264 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 Q499Y3 187 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 TTMPQ5BVD1 217 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 RBM45Q8IUH3 476 aaKnown RBP2.16□□□□□ -2.06
CHD9-215ENST00000565442 DRAXINQ8NBI3 349 aaPredicted RBP2.16□□□□□ -2.06
CHD9-215ENST00000565442 YPEL4Q96NS1 127 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 DSN1Q9H410 356 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 DUSP21Q9H596 190 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 POMKQ9H5K3 350 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 ASF1BQ9NVP2 202 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 DNAJC27Q9NZQ0 273 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 CACNA1DQ01668 2161 aa2.16□□□□□ -2.06
CHD9-215ENST00000565442 PLXNB3Q9ULL4 1909 aa2.15□□□□□ -2.06
CHD9-215ENST00000565442 A0A1B0GW15 77 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 UPK2O00526 184 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 GYG2O15488 501 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 SLC37A4O43826 429 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 ENTPD6O75354 484 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 CBR3O75828 277 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 TRGV3P03979 118 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 GIMD1P0DJR0 217 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 PRPS1L1P21108 318 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 IL12BP29460 328 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 DSTNP60981 165 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 BNIP2Q12982 314 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 SLC9A3R2Q15599 337 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 PDZD11Q5EBL8 140 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 CLEC12AQ5QGZ9 265 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 PAGE2Q7Z2X7 111 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 GALNT10Q86SR1 603 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 AMN1Q8IY45 258 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 TRIML2Q8N7C3 387 aa2.15□□□□□ -2.07
CHD9-215ENST00000565442 OR8G5Q8NG78 346 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms