RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SYT6Q5T7P8 510 aaPredicted RBP1.98□□□□□ -2.09
UBR1-205ENST00000564540 TMEM236Q5W0B7 351 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 HBMQ6B0K9 141 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 NIPAL1Q6NVV3 410 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 PAGE2Q7Z2X7 111 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 SLC7A5P1Q8MH63 180 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 C2orf73Q8N5S3 287 aaPredicted RBP1.98□□□□□ -2.09
UBR1-205ENST00000564540 METTL13Q8N6R0 699 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 LFNGQ8NES3 379 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 OR4K2Q8NGD2 314 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 OR5AK3PQ8NH89 298 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 DYNC2LI1Q8TCX1 351 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 FAM210AQ96ND0 272 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 HBEGFQ99075 208 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 SAMD10Q9BYL1 202 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 NXF2Q9GZY0 626 aaKnown RBP1.98□□□□□ -2.09
UBR1-205ENST00000564540 RDH14Q9HBH5 336 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 TMEM27Q9HBJ8 222 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 ANXA10Q9UJ72 324 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 NDRG2Q9UN36 371 aaKnown RBP1.98□□□□□ -2.09
UBR1-205ENST00000564540 SLC7A11Q9UPY5 501 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 SIGLEC7Q9Y286 467 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 USH1CQ9Y6N9 552 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 KIAA0232Q92628 1395 aa1.98□□□□□ -2.09
UBR1-205ENST00000564540 ELP1O95163 1332 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 IGKV1-27A0A075B6S5 117 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 CYTH3O43739 400 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 AHSA1O95433 338 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 SNAP29O95721 258 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 TRBV12-3P01733 135 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 ORM1P02763 201 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 HTR1DP28221 377 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 HOXA6P31267 233 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 GDI2P50395 445 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 CDKN2DP55273 166 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 RAB38P57729 211 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 MTPNP58546 118 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 UBE2NP61088 152 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 TOMM34Q15785 309 aaPredicted RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 CEACAM16Q2WEN9 425 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 CEACAM21Q3KPI0 293 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 CDNFQ49AH0 187 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 COQ5Q5HYK3 327 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 SDHAF4Q5VUM1 108 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 THOC7Q6I9Y2 204 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 DRAM2Q6UX65 266 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 RTL4Q6ZR62 310 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 DCXRQ7Z4W1 244 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 BBS7Q8IWZ6 715 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 ZCCHC24Q8N2G6 241 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 UBAC2Q8NBM4 344 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 C19orf18Q8NEA5 215 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 ATP6V1C2Q8NEY4 427 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 OR4K17Q8NGC6 315 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 OR51Q1Q8NH59 317 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 YIPF6Q96EC8 236 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 TVP23CQ96ET8 276 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 KCNS1Q96KK3 526 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 Q96MT0 163 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 MBOAT7Q96N66 472 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 TBL1YQ9BQ87 522 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 SHCBP1LQ9BZQ2 653 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 NSRP1Q9H0G5 558 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 DSN1Q9H410 356 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 DHX35Q9H5Z1 703 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 METTL8Q9H825 291 aaKnown RBP1.97□□□□□ -2.09
UBR1-205ENST00000564540 PLEKHJ1Q9NW61 149 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 ORC6Q9Y5N6 252 aa1.97□□□□□ -2.09
UBR1-205ENST00000564540 ADAMTSL3P82987 1691 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 IGHV3OR16-8A0A075B7F1 116 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 TRAV8-6A0A0B4J262 113 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 C17orf51A8MQB3 221 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 C9J4A7 227 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 FABP7O15540 132 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 GLSO94925 669 aaPredicted RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 SEMA3DO95025 777 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 DEXIO95424 95 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 RAB36O95755 333 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 MMP7P09237 267 aaPredicted RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 COX5BP10606 129 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 RPA3P35244 121 aaPredicted RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 POLR2IP36954 125 aaKnown RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 MAGEA2P43356 314 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 STC1P52823 247 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 CLDN12P56749 244 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 RHOAP61586 193 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 RPL23P62829 140 aaKnown RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 FLI1Q01543 452 aaPredicted RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 KDSRQ06136 332 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 MED21Q13503 144 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 BCL2A1Q16548 175 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 RGS21Q2M5E4 152 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 TTC32Q5I0X7 151 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 AVPI1Q5T686 147 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 MED27Q6P2C8 311 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 USP50Q70EL3 339 aaPredicted RBP1.96□□□□□ -2.1
UBR1-205ENST00000564540 BLIDQ8IZY5 108 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 TMEM251Q8N6I4 163 aa1.96□□□□□ -2.1
UBR1-205ENST00000564540 OR5L1Q8NGL2 311 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms