RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GON7Q9BXV9 100 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 C20orf85Q9H1P6 137 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 CXXC4Q9H2H0 198 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 COQ3Q9NZJ6 369 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 AK3Q9UIJ7 227 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 RELNP78509 3460 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 IGLV3-9A0A075B6K5 115 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 TMEM210A6NLX4 147 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 ABCD4O14678 606 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 PDCD6O75340 191 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 OR7C1O76099 320 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-208ENST00000563220 NDUFB6O95139 128 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 DHFRP00374 187 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 PPP3CBP16298 524 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 PRKACAP17612 351 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 DUSP1P28562 367 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 RAG2P55895 527 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 BSPH1Q075Z2 132 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 FBXL19-AS1Q494R0 122 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 SSX8Q7RTT4 187 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 DYRK2Q92630 601 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 SLC6A7Q99884 636 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 ST6GALNAC5Q9BVH7 336 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 BEX2Q9BXY8 128 aa15.32■□□□□ 0.04
COMMD4-208ENST00000563220 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A10PA6NDY2 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A18PA6NE21 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A16PA6NEW6 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A20PA6NIJ5 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A8PA6NJQ4 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A7PA6NKC0 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A22PA8MWA6 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A12PA8MX19 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A5PA8MXJ8 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A23PA8MXZ1 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A15PP0C7V4 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A13PP0C7W8 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A14PP0C7W9 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM90A24PP0C7X0 464 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FUT3P21217 361 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 HRH1P35367 487 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 CBX5P45973 191 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 KLF3P57682 345 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 ERVK11-1P61568 191 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 HOGA1Q86XE5 327 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 FAM58AQ8N1B3 248 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 NUP37Q8NFH4 326 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 GRPEL2Q8TAA5 225 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 MAFIPQ8WZ33 124 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 MRPL37Q9BZE1 423 aaKnown RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 NPDC1Q9NQX5 325 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 UBE2QL1A1L167 161 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 AMY2AP04746 511 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 CSN2P05814 226 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 GRNP28799 593 aaKnown RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 RPS23P62266 143 aaKnown RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 NKPD1Q17RQ9 610 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 PRAMEF6Q5VXH4 476 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 BPIFB2Q8N4F0 458 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 SPERTQ8NA61 448 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 OR4K15Q8NH41 348 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 RNASE6Q93091 150 aaKnown RBP15.31■□□□□ 0.04
COMMD4-208ENST00000563220 PLSCR3Q9NRY6 295 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 BOLA1Q9Y3E2 137 aa15.31■□□□□ 0.04
COMMD4-208ENST00000563220 ZSCAN5BA6NJL1 495 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 ARPC1BO15143 372 aaKnown RBP15.3■□□□□ 0.04
COMMD4-208ENST00000563220 PMP2P02689 132 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 PGA5P0DJD9 388 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 ESPL1Q14674 2120 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 MPPED2Q15777 294 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 MICBQ29980 383 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 RNASE10Q5GAN6 216 aaKnown RBP15.3■□□□□ 0.04
COMMD4-208ENST00000563220 ZNF826PQ6ZT77 177 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 CMSS1Q9BQ75 279 aaKnown RBP15.3■□□□□ 0.04
COMMD4-208ENST00000563220 NRIP2Q9BQI9 281 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 GINS4Q9BRT9 223 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 GHITMQ9H3K2 345 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 PLK3Q9H4B4 646 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 BEX1Q9HBH7 125 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 POLDIP2Q9Y2S7 368 aa15.3■□□□□ 0.04
COMMD4-208ENST00000563220 IGKV1D-8A0A087WSZ0 117 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 A0A0A6YYJ9 748 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 PRSS44E7EML9 344 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 MEF2DQ14814 521 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 RBMS2Q15434 407 aaKnown RBP15.29■□□□□ 0.04
COMMD4-208ENST00000563220 Q5BKY6 102 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 SLC22A25Q6T423 547 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 BEST4Q8NFU0 473 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 OR2Z1Q8NG97 314 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 LINC01560Q8TB33 94 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 TLNRD1Q9H1K6 362 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 CA10Q9NS85 328 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 TAAR3PQ9P1P4 343 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 ERRFI1Q9UJM3 462 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-208ENST00000563220 PYCARD-AS1I3L0S3 204 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 MPV17LQ2QL34 196 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 IDO2Q6ZQW0 420 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 MRPL24Q96A35 216 aaKnown RBP15.29■□□□□ 0.04
COMMD4-208ENST00000563220 RHOFQ9HBH0 211 aa15.29■□□□□ 0.04
COMMD4-208ENST00000563220 ZNF701Q9NV72 531 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms