RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 MRI1Q9BV20 369 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 EXOSC4Q9NPD3 245 aaKnown RBP11.63□□□□□ -0.55
IFT140-205ENST00000561954 MRPS28Q9Y2Q9 187 aaKnown RBP11.63□□□□□ -0.55
IFT140-205ENST00000561954 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.55
IFT140-205ENST00000561954 TRIM64CA6NLI5 447 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 F8VVB4 439 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 F8VWA3 439 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 PDCD5O14737 125 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 LIPFP07098 398 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 SFTPBP07988 381 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 NDUFB7P17568 137 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 GP2P55259 537 aaKnown RBP11.62□□□□□ -0.55
IFT140-205ENST00000561954 SCGB2A2Q13296 93 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 IL13RA2Q14627 380 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 DGUOKQ16854 277 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 CR1LQ2VPA4 569 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 NHLRC3Q5JS37 347 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 ASCL4Q6XD76 172 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 Q71RC1 249 aaPredicted RBP11.62□□□□□ -0.55
IFT140-205ENST00000561954 LRRTM1Q86UE6 522 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 OR6M1Q8NGM8 313 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 RAB40AQ8WXH6 277 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 MRPS24Q96EL2 167 aaKnown RBP11.62□□□□□ -0.55
IFT140-205ENST00000561954 DMRTB1Q96MA1 342 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 NUDT16L1Q9BRJ7 211 aaKnown RBP11.62□□□□□ -0.55
IFT140-205ENST00000561954 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 CST11Q9H112 138 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 CNTD2Q9H8S5 307 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 SSR3Q9UNL2 185 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 GSTK1Q9Y2Q3 226 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 MTORP42345 2549 aa11.62□□□□□ -0.55
IFT140-205ENST00000561954 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 TRAV1-2A0A0B4J238 106 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 A0A1B0GW55 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 C22orf46C9J442 243 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 INAFM1C9JVW0 142 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 SH2D1BO14796 132 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L2P0CJ85 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L3P0CJ86 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L4P0CJ87 422 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L5P0CJ88 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L6P0CJ89 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L7P0CJ90 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 GTF2F2P13984 249 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 CD36P16671 472 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 AMY2BP19961 511 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 FGF9P31371 208 aaPredicted RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 CEBPDP49716 269 aaPredicted RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 FAHD2BQ6P2I3 314 aaPredicted RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4L9Q6RFH8 374 aaPredicted RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 GLIPR1L1Q6UWM5 242 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 BTN2A1Q7KYR7 527 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 RNF144BQ7Z419 303 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 OR8H2Q8N162 312 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 OSR2Q8N2R0 312 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 CD177Q8N6Q3 437 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 ZNRF1Q8ND25 227 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 Q8NFD4 153 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 OR51T1Q8NGJ9 327 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 FAHD2AQ96GK7 314 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 MRPS26Q9BYN8 205 aaKnown RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 PPIL3Q9H2H8 161 aaKnown RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 IL36RNQ9UBH0 155 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 DUX4Q9UBX2 424 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 RPUSD1Q9UJJ7 312 aaKnown RBP11.61□□□□□ -0.55
IFT140-205ENST00000561954 ING4Q9UNL4 249 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 MAB21L2Q9Y586 359 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 MED13LQ71F56 2210 aa11.61□□□□□ -0.55
IFT140-205ENST00000561954 TLN2Q9Y4G6 2542 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 A0A1W2PPH5 198 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 CDRT1O95170 752 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 HTR3BO95264 441 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 TK1P04183 234 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 PPIAL4GP0DN37 164 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 SELLP14151 372 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 ZNF44P15621 663 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 JUNBP17275 347 aaPredicted RBP11.6□□□□□ -0.55
IFT140-205ENST00000561954 ADRA2CP18825 462 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 SERPINA2P20848 420 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 GABRR1P24046 479 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 SNU13P55769 128 aaKnown RBP11.6□□□□□ -0.55
IFT140-205ENST00000561954 RBM11P57052 281 aaKnown RBP11.6□□□□□ -0.55
IFT140-205ENST00000561954 PAX2Q02962 417 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 COL10A1Q03692 680 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 MPV17LQ2QL34 196 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 CHRFAM7AQ494W8 412 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 SLC22A6Q4U2R8 563 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 C1orf100Q5SVJ3 147 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 C22orf42Q6IC83 251 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 GDPD3Q7L5L3 318 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 LYPD6Q86Y78 171 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 CMTM4Q8IZR5 234 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 KIR3DL3Q8N743 410 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 OR4D6Q8NGJ1 314 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 OR5D13Q8NGL4 314 aa11.6□□□□□ -0.55
IFT140-205ENST00000561954 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms