RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PRKACAP17612 351 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 PRKACBP22694 351 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 PROK1P58294 105 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 GALEQ14376 348 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 LRRC75BQ2VPJ9 315 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 LHFPL2Q6ZUX7 228 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 RNF144BQ7Z419 303 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 Q8IYB0 196 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 FAM58AQ8N1B3 248 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 TPRX1Q8N7U7 411 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR5D18Q8NGL1 313 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 RHOXF1Q8NHV9 184 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 APH1BQ8WW43 257 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 SPSB1Q96BD6 273 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 MRPL48Q96GC5 212 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 HEXA-AS1Q9H8Q6 139 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 FAM118AQ9NWS6 357 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 ERVK13-1Q9NX77 482 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 C17orf98A8MV24 154 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 BAG2O95816 211 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 GABRR1P24046 479 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 SYS1Q8N2H4 156 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR52N4Q8NGI2 321 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR52I1Q8NGK6 324 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 SNX22Q96L94 193 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 Q96MT0 163 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF649Q9BS31 505 aa13.97□□□□□ -0.17
CDC42BPB-208ENST00000561271 PLXNB1O43157 2135 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 IGKV1-12A0A0C4DH73 117 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 E9PI62 339 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 SIRPB1O00241 398 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 PSPNO60542 156 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 CLPXO76031 633 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 FADS2O95864 444 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 IGKV1D-12P01611 117 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF728P0DKX0 622 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 TGFBR2P37173 567 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 RAB40BQ12829 278 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 PDZK1IP1Q13113 114 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 GRK1Q15835 563 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 SMN1Q16637 294 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 PLA1AQ53H76 456 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF714Q96N38 554 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 PDCD1LG2Q9BQ51 273 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 C16orf95Q9H693 158 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 NEK6Q9HC98 313 aa13.96□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZFPL1O95159 310 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 ARG1P05089 322 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 OR3A1P47881 315 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 LGALS4P56470 323 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 ZSCAN26Q16670 478 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 CRIP3Q6Q6R5 217 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 OR4S1Q8NGB4 309 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 TSEN15Q8WW01 171 aaKnown RBP13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 MEGF9Q9H1U4 602 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 ZCCHC4Q9H5U6 513 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 INPP5EQ9NRR6 644 aa13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 SMPD3Q9NY59 655 aaPredicted RBP13.95□□□□□ -0.18
CDC42BPB-208ENST00000561271 TMEM212A6NML5 194 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 ODF3BA8MYP8 253 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 WIPF1O43516 503 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 CHST1O43916 411 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 WBP4O75554 376 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 TSPAN9O75954 239 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 RBP4P02753 201 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 HCKP08631 526 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 IGHV1-8P0DP01 117 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 PEX2P28328 305 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 ZNF146Q15072 292 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 SPIN3Q5JUX0 258 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 LPCAT4Q643R3 524 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 PPP1R35Q8TAP8 253 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 STMN2Q93045 179 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 COMMD4Q9H0A8 199 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 HMG20AQ9NP66 347 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 GSTK1Q9Y2Q3 226 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 RPL36Q9Y3U8 105 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 LINC00312Q9Y6C7 94 aa13.94□□□□□ -0.18
CDC42BPB-208ENST00000561271 hADV38S2A0JD32 116 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 KDM4BO94953 1096 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 CLIC3O95833 236 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 OR2H2O95918 312 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 MT-ND2P03891 347 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 CCDC159P0C7I6 412 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 LIMS3P0CW19 117 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 LIMS4P0CW20 117 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 MEF2CQ06413 473 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 AANATQ16613 207 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 LDLRAD2Q5SZI1 272 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 ZNF626Q68DY1 528 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 SLC35E4Q6ICL7 350 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 ZNF555Q8NEP9 628 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 OR13D1Q8NGV5 346 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 OR5AK2Q8NH90 309 aa13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 RGP1Q92546 391 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-208ENST00000561271 SEBOXQ9HB31 216 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms