RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 LOC102725191A0A1B0GVB3 256 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 A0A1B0GW64 132 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 A0A1B0GX78 115 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MEX3AA1L020 520 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 C5orf51A6NDU8 294 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CRYM-AS1A6NIL9 109 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZNF726A6NNF4 738 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 DHRS7CA6NNS2 312 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SERPINE3A8MV23 424 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 F8W036 122 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 UBE2CO00762 179 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TAAR5O14804 337 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SMAD9O15198 467 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 SOCS1O15524 211 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MBTPS2O43462 519 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SYT7O43581 403 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PRKNO60260 465 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 DEDDO75618 318 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ADAP1O75689 374 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 RAD51DO75771 328 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MPZL1O95297 269 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 NUDT14O95848 222 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CST4P01036 141 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 APOC1P02654 83 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 S100A8P05109 93 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HPNP05981 417 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CD5P06127 495 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CYC1P08574 325 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 FCGR3AP08637 254 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 NR2C1P13056 603 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CTSEP14091 401 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MUC1P15941 1255 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZNF823P16415 610 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GNB3P16520 340 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZNF708P17019 499 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZNF17P17021 662 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 RCC1P18754 421 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 BCKDHBP21953 392 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ANOS1P23352 680 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 LAP3P28838 519 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 AVPR2P30518 371 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HOXD3P31249 432 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZNF93P35789 620 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 PMELP40967 661 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PTGDSP41222 190 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 LPAR6P43657 344 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR3A4PP47883 348 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 EMP2P54851 167 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 F2RL1P55085 397 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 BIDP55957 195 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TMEM50BP56557 158 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ZNF121P58317 390 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 GRB2P62993 217 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 HIST1H3AP68431 136 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 NKX6-1P78426 367 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 AIMP2Q13155 320 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 C1orf61Q13536 156 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 RAB32Q13637 225 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ARL6IP1Q15041 203 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TAF13Q15543 124 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SLC9A3R2Q15599 337 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OR7A5Q15622 319 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HMGN3Q15651 99 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HIST3H3Q16695 136 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PLPPR5Q32ZL2 321 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GFOD2Q3B7J2 385 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 C14orf28Q4W4Y0 310 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 BEX5Q5H9J7 111 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 THEM4Q5T1C6 240 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 C10orf128Q5T292 105 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HIST2H3PS2Q5TEC6 136 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OTPQ5XKR4 325 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 RTL6Q6ICC9 239 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 EIF5AL1Q6IS14 154 aaKnown RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 TMEM88Q6PEY1 159 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 SLC25A47Q6Q0C1 308 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 KLHL24Q6TFL4 600 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 OPN5Q6U736 354 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CLEC18BQ6UXF7 455 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 UNQ6126/PRO20091Q6UXV3 157 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 LANCL3Q6ZV70 420 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 HIST2H3AQ71DI3 136 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 H1FNTQ75WM6 255 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 SLC16A14Q7RTX9 510 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 RNF144BQ7Z419 303 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TMEM200AQ86VY9 491 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GKN2Q86XP6 184 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ANGPTL5Q86XS5 388 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 KMT5CQ86Y97 462 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 GTPBP8Q8N3Z3 284 aaPredicted RBP2.12□□□□□ -2.07
SPG11-223ENST00000560858 C15orf54Q8N8G6 183 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 LRTM2Q8N967 370 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 UBAC2Q8NBM4 344 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 APCDD1LQ8NCL9 501 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 BHLHE23Q8NDY6 225 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 TMEM104Q8NE00 496 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 PLPP5Q8NEB5 264 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 CCDC54Q8NEL0 328 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 NFAM1Q8NET5 270 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms