RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FGF12P61328 243 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 CEP78Q5JTW2 689 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 UBE2NLQ5JXB2 153 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 FAM201AQ5SY85 155 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 HACD4Q5VWC8 232 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 MZT2BQ6NZ67 158 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 DRAM2Q6UX65 266 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 ZNF841Q6ZN19 808 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 PRSS35Q8N3Z0 413 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 OR13C3Q8NGS6 347 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 TECTBQ96PL2 329 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 PPIL3Q9H2H8 161 aaKnown RBP11.27□□□□□ -0.61
SMAD3-214ENST00000560402 ZCCHC4Q9H5U6 513 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 SPATA2Q9UM82 520 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 FOXJ3Q9UPW0 622 aa11.27□□□□□ -0.61
SMAD3-214ENST00000560402 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
SMAD3-214ENST00000560402 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 A0A0G2JK05 382 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-214ENST00000560402 A0A1B0GVG6 124 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 IFITM5A6NNB3 132 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 HOXA3O43365 443 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-214ENST00000560402 IL7P13232 177 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 FSTP19883 344 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 CA6P23280 308 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 CFHR2P36980 270 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 OR10A3P58181 314 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 GLT8D1Q68CQ7 371 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 PYHIN1Q6K0P9 492 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 NKAIN3Q8N8D7 197 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 PNLDC1Q8NA58 520 aaKnown RBP11.26□□□□□ -0.61
SMAD3-214ENST00000560402 CCDC54Q8NEL0 328 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 OR4F5Q8NH21 305 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 RGP1Q92546 391 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-214ENST00000560402 FAM71F1Q96KD3 344 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-214ENST00000560402 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
SMAD3-214ENST00000560402 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 LOC107986453A0A1B0GWG9 222 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 GGT3PA6NGU5 568 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 C22orf46C9J442 243 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 XRCC2O43543 280 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 CRYBA1P05813 215 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 PSKH1P11801 424 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 ATF1P18846 271 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 ELK1P19419 428 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 MDKP21741 143 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-214ENST00000560402 PRSS12P56730 875 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 ZNF92Q03936 586 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 MFGE8Q08431 387 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-214ENST00000560402 PDCD1Q15116 288 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 MPPED2Q15777 294 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 ZNF79Q15937 498 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 ODF4Q2M2E3 257 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 SNAI3Q3KNW1 292 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 Q6YL49 198 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 Q8N402 240 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-214ENST00000560402 FOXRED1Q96CU9 486 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-214ENST00000560402 BEX1Q9HBH7 125 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 C14orf119Q9NWQ9 140 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 CTSZQ9UBR2 303 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 NUFIP1Q9UHK0 495 aaKnown RBP11.25□□□□□ -0.61
SMAD3-214ENST00000560402 SLC22A13Q9Y226 551 aa11.25□□□□□ -0.61
SMAD3-214ENST00000560402 OOEPA6NGQ2 149 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-214ENST00000560402 PIN1P1O15428 100 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 ADAM20O43506 726 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 SYT7O43581 403 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 SRSF10O75494 262 aaKnown RBP11.24□□□□□ -0.61
SMAD3-214ENST00000560402 TPPPO94811 219 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 TOX4O94842 621 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 NDUFA7O95182 113 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 ECDO95905 644 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-214ENST00000560402 KNG1P01042 644 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 MMP9P14780 707 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 ZNF20P17024 532 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 DDOSTP39656 456 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 RAG2P55895 527 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 IFITM3Q01628 133 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 ASAH1Q13510 395 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 OR8B8Q15620 311 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 RAB11BQ15907 218 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 METTL11BQ5VVY1 283 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 NAA40Q86UY6 237 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 COMMD2Q86X83 199 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 ELMOD2Q8IZ81 293 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 LGALS14Q8TCE9 139 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 SSMEM1Q8WWF3 244 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
SMAD3-214ENST00000560402 PHF21AQ96BD5 680 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms