RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 GALR1P47211 349 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 ZNF92Q03936 586 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 TMEM196Q5HYL7 178 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 LDLRAD2Q5SZI1 272 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 LHFPL1Q86WI0 220 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 ELL3Q9HB65 397 aaPredicted RBP16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 TMEM9BQ9NQ34 198 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 COX11Q9Y6N1 276 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 AMY2BP19961 511 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 SQSTM1Q13501 440 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 CST6Q15828 149 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 ZNF658BQ4V348 819 aaPredicted RBP16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 FDX2Q6P4F2 183 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 FBXW12Q6X9E4 464 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 BOD1Q96IK1 185 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 GPR84Q9NQS5 396 aa16.78■□□□□ 0.28
SEMA4B-215ENST00000560089 IGHV2-70DA0A0C4DH43 119 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 IGLON5A6NGN9 336 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 YPEL1O60688 119 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 SMPD2O60906 423 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 CLEC3AO75596 197 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 COL9A1P20849 921 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 SLC17A1Q14916 467 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 WDFY1Q8IWB7 410 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 DOK4Q8TEW6 326 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 YPEL2Q96QA6 119 aa16.77■□□□□ 0.28
SEMA4B-215ENST00000560089 MAP1LC3B2A6NCE7 125 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 HBE1P02100 147 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 HOXB2P14652 356 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 ADIRFQ15847 76 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 OCIAD2Q56VL3 154 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 OGFOD3Q6PK18 319 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 H1FOOQ8IZA3 346 aaPredicted RBP16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 OR51G1Q8NGK1 321 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 RHBDD1Q8TEB9 315 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 MAP1LC3BQ9GZQ8 125 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 CALHM2Q9HA72 323 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 HSPB7Q9UBY9 170 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 TRPM6Q9BX84 2022 aa16.77■□□□□ 0.27
SEMA4B-215ENST00000560089 A0A1B0GUS0 222 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 DDAH2O95865 285 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 CSNK1A1P48729 337 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 RAB38P57729 211 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 ZNF266Q14584 549 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 FBXO42Q6P3S6 717 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 UNQ5815/PRO19632Q6UWF5 114 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 VN1R17PQ8TDU5 208 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 TBL1XR1Q9BZK7 514 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 UBE2ZQ9H832 354 aaPredicted RBP16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 SP5Q6BEB4 398 aaPredicted RBP16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 NUS1Q96E22 293 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 Q9N2K0 584 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 LAMTOR2Q9Y2Q5 125 aa16.76■□□□□ 0.27
SEMA4B-215ENST00000560089 NUPR1O60356 82 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 GPR1P46091 355 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 PRDX4Q13162 271 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 FCRL6Q6DN72 434 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 COX15Q7KZN9 410 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 NICN1Q9BSH3 213 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 ZFP92A6NM28 416 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 VSIG8P0DPA2 414 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 AGBL4Q5VU57 503 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 DPPA3Q6W0C5 159 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 B9D1Q9UPM9 204 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 SPEGQ15772 3267 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 GON4LQ3T8J9 2241 aa16.75■□□□□ 0.27
SEMA4B-215ENST00000560089 H7BYZ3 331 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 EMP2P54851 167 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 RUNX2Q13950 521 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 IMMP2LQ96T52 175 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 GABRG3Q99928 467 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 CST9LQ9H4G1 147 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 ZNF430Q9H8G1 570 aaPredicted RBP16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 ZNF701Q9NV72 531 aaPredicted RBP16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 OR6C3Q9NZP0 311 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 IL19Q9UHD0 177 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 CTSBP07858 339 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 EFNA3P52797 238 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 CSNK1G2P78368 415 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 EWSR1Q01844 656 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 TFF2Q03403 129 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 Q6ZWC4 215 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 RPUSD4Q96CM3 377 aaKnown RBP16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 MAGT1Q9H0U3 335 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 VPS13AQ96RL7 3174 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 NTSR1P30989 418 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 TCEA2Q15560 299 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 CATSPERDQ86XM0 798 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 LRRC25Q8N386 305 aaPredicted RBP16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 C10orf53Q8N6V4 93 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 ZNF709Q8N972 641 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 OR14C36Q8NHC7 312 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 OTOSQ8NHW6 89 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 KIR3DX1Q9H7L2 352 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 LYRM2Q9NU23 88 aaPredicted RBP16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 RHBDD3Q9Y3P4 386 aa16.74■□□□□ 0.27
SEMA4B-215ENST00000560089 CLEC18AA5D8T8 446 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 C17orf105B2RV13 164 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 CTXN1P60606 82 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms