RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 OLFML2AQ68BL7 652 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SFRP4Q6FHJ7 346 aaPredicted RBP4.38□□□□□ -1.71
SPG11-220ENST00000559933 WDR82Q6UXN9 313 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 KRT74Q7RTS7 529 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SSX8Q7RTT4 187 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 DTX2Q86UW9 622 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 TPRA1Q86W33 373 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SNX29P2Q8IUI4 249 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 FTMTQ8N4E7 242 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 GCSAMQ8N6F7 178 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CELF2-AS1Q8N7Q2 184 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SAMD12Q8N8I0 201 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CCDC54Q8NEL0 328 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 OR5T2Q8NGG2 359 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 OR5A2Q8NGI9 324 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 OR6M1Q8NGM8 313 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 OR13G1Q8NGZ3 307 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 MCFD2Q8NI22 146 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 ZNF671Q8TAW3 534 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 LRRC29Q8WV35 223 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 THRSPQ92748 146 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 ITFG2Q969R8 447 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SPSB1Q96BD6 273 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 FAM3DQ96BQ1 224 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 C10orf35Q96D05 121 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 C1orf159Q96HA4 380 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 HIST1H2AAQ96QV6 131 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CCL19Q99731 98 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 NARFLQ9H6Q4 476 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 SAP30LQ9HAJ7 183 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 CBLN4Q9NTU7 201 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 PTTG2Q9NZH5 202 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 NDUFA13Q9P0J0 144 aa4.38□□□□□ -1.71
SPG11-220ENST00000559933 A0A075B6Q4 140 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 MEX3AA1L020 520 aaKnown RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 OR5B21A6NL26 309 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 TMEM14DPA8MWL7 114 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 FAM25AB3EWG3 89 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 FAM25CB3EWG5 89 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 FAM25GB3EWG6 89 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 J3QRK9 145 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 SIRPB1O00241 398 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 GEMIN2O14893 280 aaKnown RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 LDLRAD4O15165 306 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 FCN3O75636 299 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 CLPXO76031 633 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 IGHV4-39P01824 125 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ALDOBP05062 364 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 FCER2P06734 321 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 CD55P08174 381 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 CD37P11049 281 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ARSBP15848 533 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 MGMTP16455 207 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 PRKACAP17612 351 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ELK1P19419 428 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 TUBG1P23258 451 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 GABRR1P24046 479 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 SOX6P35712 828 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 PPOXP50336 477 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 RIN1Q13671 783 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 RSU1Q15404 277 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 DGUOKQ16854 277 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 PRR31Q5SQ13 230 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 AGAP6Q5VW22 663 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 C5orf24Q7Z6I8 188 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ZNF573Q86YE8 665 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 CMTM4Q8IZR5 234 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ZNF525Q8N782 197 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 POC1AQ8NBT0 407 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 DEFB108BQ8NET1 73 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 OR4M1Q8NGD0 313 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 OR6Q1Q8NGQ2 317 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 OR51F2Q8NH61 342 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 IGFBPL1Q8WX77 278 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 CCL17Q92583 94 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 EMG1Q92979 244 aaKnown RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 PERPQ96FX8 193 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 CEP19Q96LK0 163 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 NRIP2Q9BQI9 281 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 UQCC2Q9BRT2 126 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 HDHD3Q9BSH5 251 aaPredicted RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 SELENOIQ9C0D9 397 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 NXF2Q9GZY0 626 aaKnown RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 METTL9Q9H1A3 318 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 LPAR5Q9H1C0 372 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 TLNRD1Q9H1K6 362 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ZMAT3Q9HA38 289 aaKnown RBP4.37□□□□□ -1.71
SPG11-220ENST00000559933 TUBG2Q9NRH3 451 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 DECR2Q9NUI1 292 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 OR14J1Q9UGF5 321 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 DSCAMO60469 2012 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 TEX15Q9BXT5 2789 aa4.37□□□□□ -1.71
SPG11-220ENST00000559933 APCP25054 2843 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 DYSFO75923 2080 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 IGKV1D-17A0A075B6S4 117 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 IGHV1-69-2A0A0G2JMI3 117 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 A0A0G2JMP0 313 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms