RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZNF44P15621 663 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 PRKACAP17612 351 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 AMY2BP19961 511 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 MAPK3P27361 379 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZNF93P35789 620 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 SOX2P48431 317 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ETV1P50549 477 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 UBE2E1P51965 193 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 GTF2A1P52655 376 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 LGALS4P56470 323 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 WNT4P56705 351 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ERVFRD-1P60508 538 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 UBA52P62987 128 aaKnown RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 MEF2CQ06413 473 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 ACSM1Q08AH1 577 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 RIPK1Q13546 671 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZNF146Q15072 292 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 CDK5R1Q15078 307 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 RSU1Q15404 277 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 SLC9A3R2Q15599 337 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 GRK1Q15835 563 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DEFB112Q30KQ8 113 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 YIF1BQ5BJH7 314 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 OR2G6Q5TZ20 316 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 C16orf87Q6PH81 154 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4L9Q6RFH8 374 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 Q6YL49 198 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 AHSA2Q719I0 299 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 TRAPPC6BQ86SZ2 158 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 SATL1Q86VE3 508 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 PDZD9Q8IXQ8 264 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 SAXO1Q8IYX7 474 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 BCL6BQ8N143 479 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 OR8H2Q8N162 312 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 BATF2Q8N1L9 274 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 TMEM86BQ8N661 226 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 CD177Q8N6Q3 437 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 C3orf56Q8N813 242 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 CHST4Q8NCG5 386 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 OR4M1Q8NGD0 313 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 OR5D18Q8NGL1 313 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 OR10AC1Q8NH08 325 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 GGHQ92820 318 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 GHSRQ92847 366 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 SNX22Q96L94 193 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZNF488Q96MN9 340 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX5Q96PT3 197 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 TBX15Q96SF7 602 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZNF649Q9BS31 505 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 MND1Q9BWT6 205 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 FAM192AQ9GZU8 254 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 SIRPDQ9H106 197 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 HEXA-AS1Q9H8Q6 139 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZFAND3Q9H8U3 227 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 UNKLQ9H9P5 680 aaKnown RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 SEBOXQ9HB31 216 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 ELL3Q9HB65 397 aaPredicted RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 EXOSC4Q9NPD3 245 aaKnown RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 SIRT7Q9NRC8 400 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 PLCXD1Q9NUJ7 323 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 RBFOX1Q9NWB1 397 aaKnown RBP3.6□□□□□ -1.83
SNX1-205ENST00000559339 DUX4Q9UBX2 424 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 CLEC2DQ9UHP7 191 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 PSORS1C1Q9UIG5 152 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 ZNF222Q9UK12 451 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 GSTK1Q9Y2Q3 226 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 TPRKBQ9Y3C4 175 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 MAB21L2Q9Y586 359 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 POMT1Q9Y6A1 747 aa3.6□□□□□ -1.83
SNX1-205ENST00000559339 TRGV10A0A0A0MS01 117 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 PNMA8CA0A1B0GUJ8 204 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 A0A1B0GUS0 222 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 MEIOCA2RUB1 952 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TMEM89A2RUT3 159 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 MGST3O14880 152 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 DEGS1O15121 323 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 NPFFO15130 113 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 OGG1O15527 345 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 SPRY1O43609 319 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 ANGPTL7O43827 346 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 XPNPEP2O43895 674 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 FCN3O75636 299 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 KDM4BO94953 1096 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 RBP4P02753 201 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 TFF1P04155 84 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 ALDOBP05062 364 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 CELP19835 753 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 BCL3P20749 454 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 LMO1P25800 156 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 DUSP1P28562 367 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 C21orf33P30042 268 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 BDKRB2P30411 391 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 SAA4P35542 130 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 PTGFRP43088 359 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 NPBWR2P48146 333 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 MTNR1BP49286 362 aa3.59□□□□□ -1.83
SNX1-205ENST00000559339 CEBPDP49716 269 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 COMPP49747 757 aaPredicted RBP3.59□□□□□ -1.83
SNX1-205ENST00000559339 AQP4P55087 323 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms