RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 BTN2A1Q7KYR7 527 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 NLRC3Q7RTR2 1065 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 NR2C2APQ86WQ0 139 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 MKXQ8IYA7 352 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 FAM58AQ8N1B3 248 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 RAB40AQ8WXH6 277 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 ST8SIA4Q92187 359 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 EMG1Q92979 244 aaKnown RBP9.44□□□□□ -0.9
SNX1-204ENST00000559061 KCNK15Q9H427 330 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 SEBOXQ9HB31 216 aaPredicted RBP9.44□□□□□ -0.9
SNX1-204ENST00000559061 C19orf12Q9NSK7 152 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 OR14J1Q9UGF5 321 aa9.44□□□□□ -0.9
SNX1-204ENST00000559061 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
SNX1-204ENST00000559061 A0A0G2JMP0 313 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 A0A0X1KG70 313 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 HAND1O96004 215 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 TMEM225BP0DP42 221 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 PRKACAP17612 351 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 PSMB9P28065 219 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 NPY4RP50391 375 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 DLX1P56177 255 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 CAV3P56539 151 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 FGF12P61328 243 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 PPP3R1P63098 170 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 PDCD1Q15116 288 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 NEDD8Q15843 81 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 PIGYQ3MUY2 71 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 DCAF12L2Q5VW00 463 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 FAHD2BQ6P2I3 314 aaPredicted RBP9.43□□□□□ -0.9
SNX1-204ENST00000559061 SLC36A1Q7Z2H8 476 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 SATL1Q86VE3 508 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 Q8N7P7 452 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 OR4M2Q8NGB6 313 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 PHYHIPQ92561 330 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 FAHD2AQ96GK7 314 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 POM121Q96HA1 1249 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 TBX15Q96SF7 602 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 NUDT16L1Q9BRJ7 211 aaKnown RBP9.43□□□□□ -0.9
SNX1-204ENST00000559061 DCTN5Q9BTE1 182 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 SIRPDQ9H106 197 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 IL36GQ9NZH8 169 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 SLC25A10Q9UBX3 287 aaPredicted RBP9.43□□□□□ -0.9
SNX1-204ENST00000559061 OR5V1Q9UGF6 321 aa9.43□□□□□ -0.9
SNX1-204ENST00000559061 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
SNX1-204ENST00000559061 K7N7A8 449 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 OR2H2O95918 312 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 TK1P04183 234 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 SRMP19623 302 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 MAPK3P27361 379 aaPredicted RBP9.42□□□□□ -0.9
SNX1-204ENST00000559061 OR3A1P47881 315 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 QRFPP83859 136 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 PRB3Q04118 309 aaPredicted RBP9.42□□□□□ -0.9
SNX1-204ENST00000559061 HSD17B12Q53GQ0 312 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 C1orf100Q5SVJ3 147 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 Q8IYB0 196 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 ZNF561Q8N587 486 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 C11orf42Q8N5U0 333 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 TMEM104Q8NE00 496 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 TMEM185AQ8NFB2 350 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 OR4S1Q8NGB4 309 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 OR51T1Q8NGJ9 327 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 FCGR1BQ92637 280 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 SLC25A28Q96A46 364 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 FAM192AQ9GZU8 254 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 RNF167Q9H6Y7 350 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 C7orf69Q9H7B7 122 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 NEK6Q9HC98 313 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 GSTK1Q9Y2Q3 226 aa9.42□□□□□ -0.9
SNX1-204ENST00000559061 TRAV24A0A0B4J272 114 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 A0A0G2JK05 382 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 TRDV1A0A1B0GX56 115 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 J3QLI3 93 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 SLC33A1O00400 549 aaPredicted RBP9.41□□□□□ -0.9
SNX1-204ENST00000559061 CCRL2O00421 344 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 NDUFB3O43676 98 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 ENSAO43768 121 aaKnown RBP9.41□□□□□ -0.9
SNX1-204ENST00000559061 TNFAIP8O95379 198 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 OCMP0CE72 109 aaPredicted RBP9.41□□□□□ -0.9
SNX1-204ENST00000559061 IGHV4-38-2P0DP08 117 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 GATA3P23771 443 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 PSMA1P25786 263 aaKnown RBP9.41□□□□□ -0.9
SNX1-204ENST00000559061 LMO1P25800 156 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 MTNR1BP49286 362 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 DLX6P56179 175 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 OR10A3P58181 314 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 ZNF273Q14593 569 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 TRAM1Q15629 374 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 NHLRC3Q5JS37 347 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 SPIN3Q5JUX0 258 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 HCP5Q6MZN7 132 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 CDH26Q8IXH8 852 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 TSPAN14Q8NG11 270 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 UPRTQ96BW1 309 aa9.41□□□□□ -0.9
SNX1-204ENST00000559061 YIPF6Q96EC8 236 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms