RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 SIGLEC9Q9Y336 463 aa12.24□□□□□ -0.45
SMAD6-203ENST00000558937 GMPPBQ9Y5P6 360 aa12.24□□□□□ -0.45
SMAD6-203ENST00000558937 TET2Q6N021 2002 aaPredicted RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 FAM90A8PA6NJQ4 464 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 SNTNA6NMZ2 147 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 OR4C45A6NMZ5 311 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 CHST1O43916 411 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 PSPNO60542 156 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 TSPAN15O95858 294 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 ARG1P05089 322 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 IGHV1-8P0DP01 117 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 CALCBP10092 127 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 DBTP11182 482 aaKnown RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 PRKACAP17612 351 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 GABRR1P24046 479 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 PEX2P28328 305 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 DUSP1P28562 367 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 SNU13P55769 128 aaKnown RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 ACTA2P62736 377 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 ACTG2P63267 376 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 MEF2CQ06413 473 aaPredicted RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 ALKBH1Q13686 389 aaKnown RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 GRK1Q15835 563 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 PLA1AQ53H76 456 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 ZNF626Q68DY1 528 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 TPRX1Q8N7U7 411 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 OR51A4Q8NGJ6 313 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 OR13C3Q8NGS6 347 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 OR13D1Q8NGV5 346 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 RFT1Q96AA3 541 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 SPSB1Q96BD6 273 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 FOXRED1Q96CU9 486 aaPredicted RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 ALG8Q9BVK2 526 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 CHST6Q9GZX3 395 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 RAB18Q9NP72 206 aa12.23□□□□□ -0.45
SMAD6-203ENST00000558937 TBL2Q9Y4P3 447 aaKnown RBP12.23□□□□□ -0.45
SMAD6-203ENST00000558937 IGKV1-12A0A0C4DH73 117 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 hADV38S2A0JD32 116 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 MEGF11A6BM72 1044 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 IGKV1D-12P01611 117 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 KIR2DS4P43632 304 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 EFNB2P52799 333 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 PDZK1IP1Q13113 114 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 ZNF146Q15072 292 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 LDLRAD2Q5SZI1 272 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 LIAT1Q6ZQX7 453 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 LHFPL3Q86UP9 236 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 OR4S1Q8NGB4 309 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 OR11H6Q8NGC7 330 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 MRPL48Q96GC5 212 aaKnown RBP12.22□□□□□ -0.45
SMAD6-203ENST00000558937 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 SLC29A1Q99808 456 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 C9orf16Q9BUW7 83 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 HMG20AQ9NP66 347 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 MYRFQ9Y2G1 1151 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 LINC00312Q9Y6C7 94 aa12.22□□□□□ -0.45
SMAD6-203ENST00000558937 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 SIRPB1O00241 398 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 MGST3O14880 152 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 OCM2P0CE71 109 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 OCMP0CE72 109 aaPredicted RBP12.21□□□□□ -0.45
SMAD6-203ENST00000558937 OR3A1P47881 315 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 GALEQ14376 348 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 HERPUD1Q15011 391 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 FAM189A2Q15884 450 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 SPIN3Q5JUX0 258 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 SYS1Q8N2H4 156 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 NPFFR1Q9GZQ6 430 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 ISG20L2Q9H9L3 353 aaKnown RBP12.21□□□□□ -0.45
SMAD6-203ENST00000558937 S100A14Q9HCY8 104 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 AMBNQ9NP70 447 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 TCF19Q9Y242 345 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 SESN1Q9Y6P5 492 aa12.21□□□□□ -0.45
SMAD6-203ENST00000558937 MPZL2O60487 215 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 KDM4BO94953 1096 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 MT-ND2P03891 347 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 P2RX3P56373 397 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 DYNC1I2Q13409 638 aaKnown RBP12.2□□□□□ -0.46
SMAD6-203ENST00000558937 SSX2Q16385 188 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 C2orf68Q2NKX9 166 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
SMAD6-203ENST00000558937 C11orf88Q6PI97 169 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 C10orf67Q8IYJ2 551 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 PQLC1Q8N2U9 271 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 OR2T6Q8NHC8 308 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 RHOXF1Q8NHV9 184 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 NKX3-1Q99801 234 aaPredicted RBP12.2□□□□□ -0.46
SMAD6-203ENST00000558937 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 EXOSC4Q9NPD3 245 aaKnown RBP12.2□□□□□ -0.46
SMAD6-203ENST00000558937 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 GLS2Q9UI32 602 aa12.2□□□□□ -0.46
SMAD6-203ENST00000558937 FOXJ3Q9UPW0 622 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms