RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 PTGFRP43088 359 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 OR3A4PP47883 348 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 SNU13P55769 128 aaKnown RBP10.33□□□□□ -0.76
LRRC28-206ENST00000558471 CAV3P56539 151 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 COL10A1Q03692 680 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 SSX1Q16384 188 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 ARMCX4Q5H9R4 360 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 ASCL4Q6XD76 172 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 TMEM91Q6ZNR0 172 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 ZNF561Q8N587 486 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 LY6G5BQ8NDX9 201 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 TMEM185AQ8NFB2 350 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 PXT1Q8NFP0 134 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 H1FXQ92522 213 aaKnown RBP10.33□□□□□ -0.76
LRRC28-206ENST00000558471 THRSPQ92748 146 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 CPNE2Q96FN4 548 aaPredicted RBP10.33□□□□□ -0.76
LRRC28-206ENST00000558471 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 DCTN5Q9BTE1 182 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 MRI1Q9BV20 369 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 ELL3Q9HB65 397 aaPredicted RBP10.33□□□□□ -0.76
LRRC28-206ENST00000558471 DSCAML1Q8TD84 2053 aa10.33□□□□□ -0.76
LRRC28-206ENST00000558471 NAV3Q8IVL0 2385 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 ZNF737O75373 536 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 CDRT1O95170 752 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 HAND1O96004 215 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 CHRM2P08172 466 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 CAPZA1P52907 286 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 FABP5Q01469 135 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 ZNF146Q15072 292 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 TRAM1Q15629 374 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 KCTD21Q4G0X4 260 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 ZNF773Q6PK81 442 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 FIP1L1Q6UN15 594 aaKnown RBP10.32□□□□□ -0.76
LRRC28-206ENST00000558471 LYPD6Q86Y78 171 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 PNLDC1Q8NA58 520 aaKnown RBP10.32□□□□□ -0.76
LRRC28-206ENST00000558471 FAM192AQ9GZU8 254 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 CNTD2Q9H8S5 307 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 SEBOXQ9HB31 216 aaPredicted RBP10.32□□□□□ -0.76
LRRC28-206ENST00000558471 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 ING4Q9UNL4 249 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
LRRC28-206ENST00000558471 TMEM82A0PJX8 343 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 K7N7A8 449 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 FSHBP01225 129 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 TK1P04183 234 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 UCHL1P09936 223 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 PPIAL4GP0DN37 164 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 SRMP19623 302 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 PSMA1P25786 263 aaKnown RBP10.31□□□□□ -0.76
LRRC28-206ENST00000558471 FGF12P61328 243 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 ARF6P62330 175 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 RSU1Q15404 277 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 KLF17Q5JT82 389 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-206ENST00000558471 SPIN3Q5JUX0 258 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 ELP2Q6IA86 826 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 LRRTM1Q86UE6 522 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 PRIMA1Q86XR5 153 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 CDH26Q8IXH8 852 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 JAGN1Q8N5M9 183 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 ASCC1Q8N9N2 400 aaKnown RBP10.31□□□□□ -0.76
LRRC28-206ENST00000558471 Q8NFD4 153 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 OR10K1Q8NGX5 313 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 NANPQ8TBE9 248 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 MUL1Q969V5 352 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 UPRTQ96BW1 309 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 FAM234AQ9H0X4 552 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 TCF7L1Q9HCS4 588 aa10.31□□□□□ -0.76
LRRC28-206ENST00000558471 MXRA5Q9NR99 2828 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 MEGF11A6BM72 1044 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 SH2D1BO14796 132 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 PSPNO60542 156 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 RGS9O75916 674 aaPredicted RBP10.3□□□□□ -0.76
LRRC28-206ENST00000558471 HTR3BO95264 441 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 MMP9P14780 707 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 PSMB9P28065 219 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 GABRA5P31644 462 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 MTNR1BP49286 362 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 PDCD1Q15116 288 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 Q6P435 159 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 C17orf107Q6ZR85 190 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 TEX29Q8N6K0 151 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 OR4M1Q8NGD0 313 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 OR4D6Q8NGJ1 314 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 PHYHIPQ92561 330 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 FCGR1BQ92637 280 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 SNX22Q96L94 193 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 DMRTB1Q96MA1 342 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 WDFY2Q96P53 400 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 NR1H4Q96RI1 486 aaPredicted RBP10.3□□□□□ -0.76
LRRC28-206ENST00000558471 SIRPDQ9H106 197 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 METTL9Q9H1A3 318 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 EXOSC4Q9NPD3 245 aaKnown RBP10.3□□□□□ -0.76
LRRC28-206ENST00000558471 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 NDUFB11Q9NX14 153 aa10.3□□□□□ -0.76
LRRC28-206ENST00000558471 GLS2Q9UI32 602 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms