RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ELK1P19419 428 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 FUT3P21217 361 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 DNASE1P24855 282 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 UNC119Q13432 240 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 LSAMPQ13449 338 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 PNLIPRP3Q17RR3 467 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 SPRNQ5BIV9 151 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 TEX36Q5VZQ5 186 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 Q6ZTK2 550 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 CCDC190Q86UF4 302 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 CMTM4Q8IZR5 234 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 NINJ1Q92982 152 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 MED30Q96HR3 178 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 LPAR5Q9H1C0 372 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 RIMS4Q9H426 269 aaPredicted RBP10.45□□□□□ -0.74
TPM1-209ENST00000558072 BANF2Q9H503 90 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 ZNF701Q9NV72 531 aaPredicted RBP10.45□□□□□ -0.74
TPM1-209ENST00000558072 PLEKHJ1Q9NW61 149 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 RBFOX1Q9NWB1 397 aaKnown RBP10.45□□□□□ -0.74
TPM1-209ENST00000558072 BEX4Q9NWD9 120 aaPredicted RBP10.45□□□□□ -0.74
TPM1-209ENST00000558072 NLKQ9UBE8 527 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 DSCAMO60469 2012 aa10.45□□□□□ -0.74
TPM1-209ENST00000558072 A0A0B4J203 849 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 MCRIP1C9JLW8 97 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 NDUFS8O00217 210 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 SULT1C2O00338 296 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 PDCD6O75340 191 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 HPXP02790 462 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 CD40LGP29965 261 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 BLVRBP30043 206 aaPredicted RBP10.44□□□□□ -0.74
TPM1-209ENST00000558072 CDKN1AP38936 164 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 MDH2P40926 338 aaKnown RBP10.44□□□□□ -0.74
TPM1-209ENST00000558072 CBX5P45973 191 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 NPBWR2P48146 333 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 VEGFCP49767 419 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 IKZF1Q13422 519 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 IL18Q14116 193 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 CNIH2Q6PI25 160 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 FAM131AQ6UXB0 335 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 ZNF826PQ6ZT77 177 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 SLC36A1Q7Z2H8 476 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 LAX1Q8IWV1 398 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 GCSAMQ8N6F7 178 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 GDPD1Q8N9F7 314 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 TMEM104Q8NE00 496 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 OR5D13Q8NGL4 314 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 OR10K1Q8NGX5 313 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 IGFBPL1Q8WX77 278 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 SLC25A38Q96DW6 304 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 NKX3-1Q99801 234 aaPredicted RBP10.44□□□□□ -0.74
TPM1-209ENST00000558072 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM1-209ENST00000558072 TREM2Q9NZC2 230 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 WIPI2Q9Y4P8 454 aa10.44□□□□□ -0.74
TPM1-209ENST00000558072 CACNA1DQ01668 2161 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 OR2AT4A6NND4 320 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 CTDSPLO15194 276 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 HAND1O96004 215 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 EIF4EP06730 217 aaKnown RBP10.43□□□□□ -0.74
TPM1-209ENST00000558072 ZNF44P15621 663 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 GABRR1P24046 479 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 CDK2P24941 298 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 LMO1P25800 156 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 PDLIM4P50479 330 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 TAF9Q16594 264 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 ATPAF1Q5TC12 328 aaPredicted RBP10.43□□□□□ -0.74
TPM1-209ENST00000558072 HACD4Q5VWC8 232 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 SHEQ5VZ18 495 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 OR10K2Q6IF99 312 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 RNF144BQ7Z419 303 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 LRRC75A-AS1Q8N1F1 130 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 ZNF561Q8N587 486 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 SPICQ8N5J4 248 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 BOLLQ8N9W6 283 aaKnown RBP10.43□□□□□ -0.74
TPM1-209ENST00000558072 GSX2Q9BZM3 304 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 FAM234AQ9H0X4 552 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 MIXL1Q9H2W2 232 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 ZNF665Q9H7R5 613 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 SCPEP1Q9HB40 452 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 MGAT4AQ9UM21 535 aa10.43□□□□□ -0.74
TPM1-209ENST00000558072 TRAV18A0A075B6X5 111 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 RAB27BO00194 218 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 GEMIN2O14893 280 aaKnown RBP10.42□□□□□ -0.74
TPM1-209ENST00000558072 GPR37O15354 613 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 NDUFS7O75251 213 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 LY6HO94772 140 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 CYB5R3P00387 301 aaPredicted RBP10.42□□□□□ -0.74
TPM1-209ENST00000558072 HIST1H1DP16402 221 aaKnown RBP10.42□□□□□ -0.74
TPM1-209ENST00000558072 PRDX2P32119 198 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 PRSS3P35030 304 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 EFNB2P52799 333 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 TAS2R20P59543 309 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 BTG1P62324 171 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
TPM1-209ENST00000558072 SSBP1Q04837 148 aaKnown RBP10.42□□□□□ -0.74
TPM1-209ENST00000558072 C11orf91Q3C1V1 193 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 TMEM155Q4W5P6 130 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 ATAD3CQ5T2N8 411 aa10.42□□□□□ -0.74
TPM1-209ENST00000558072 OR4M1Q8NGD0 313 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms