RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PDCD6O75340 191 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 CYB5R3P00387 301 aaPredicted RBP14.19□□□□□ -0.14
SNX1-203ENST00000558040 GSTP1P09211 210 aaKnown RBP14.19□□□□□ -0.14
SNX1-203ENST00000558040 HIST1H1DP16402 221 aaKnown RBP14.19□□□□□ -0.14
SNX1-203ENST00000558040 EGR1P18146 543 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 COL8A1P27658 744 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 PTH2RP49190 550 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 ZNF79Q15937 498 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 NKAPLQ5M9Q1 402 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 Q6ZTK2 550 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 SNX29P2Q8IUI4 249 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 GDPD1Q8N9F7 314 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 RDH5Q92781 318 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 SRRQ9GZT4 340 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 WDR13Q9H1Z4 485 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 CXorf56Q9H5V9 222 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 IFT22Q9H7X7 185 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 PLEKHJ1Q9NW61 149 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 TREM2Q9NZC2 230 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 NLKQ9UBE8 527 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 IL36RNQ9UBH0 155 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 HSF4Q9ULV5 492 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 PLEKHA6Q9Y2H5 1048 aa14.19□□□□□ -0.14
SNX1-203ENST00000558040 PKDREJQ9NTG1 2253 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 FLNCQ14315 2725 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 FOXI3A8MTJ6 420 aaPredicted RBP14.18□□□□□ -0.14
SNX1-203ENST00000558040 TMEM178BH3BS89 294 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 DEGS1O15121 323 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 CTDSPLO15194 276 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 HLA-DQB1P01920 261 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 ZNF44P15621 663 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 FUT3P21217 361 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 CDKN1AP38936 164 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 MICBQ29980 383 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 CDNFQ49AH0 187 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 ATAD3CQ5T2N8 411 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 BORCS5Q969J3 196 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 ARHGAP5-AS1Q96IT6 56 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 ABHD1Q96SE0 405 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 CCDC32Q9BV29 185 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 AUNIPQ9H7T9 357 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
SNX1-203ENST00000558040 WIPI2Q9Y4P8 454 aa14.18□□□□□ -0.14
SNX1-203ENST00000558040 CHD3Q12873 2000 aaKnown RBP14.18□□□□□ -0.14
SNX1-203ENST00000558040 SERPINE3A8MV23 424 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.17□□□□□ -0.14
SNX1-203ENST00000558040 OVOL3O00110 214 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 HAND1O96004 215 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 MUC1P15941 1255 aaPredicted RBP14.17□□□□□ -0.14
SNX1-203ENST00000558040 GNB3P16520 340 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 CHATP28329 748 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 DUSP1P28562 367 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 CD80P33681 288 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 PRSS3P35030 304 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 TMEM50BP56557 158 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 SCN1BQ07699 218 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 PNLIPRP3Q17RR3 467 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 ZNF260Q3ZCT1 412 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 PLAC9Q5JTB6 97 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 TEX36Q5VZQ5 186 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 PEG10Q86TG7 708 aaKnown RBP14.17□□□□□ -0.14
SNX1-203ENST00000558040 MARVELD3Q96A59 401 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 PECRQ9BY49 303 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNX1-203ENST00000558040 RCC2Q9P258 522 aaKnown RBP14.17□□□□□ -0.14
SNX1-203ENST00000558040 OR14J1Q9UGF5 321 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 CACNG2Q9Y698 323 aa14.17□□□□□ -0.14
SNX1-203ENST00000558040 DYSFO75923 2080 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 CACNA1DQ01668 2161 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 PPIAL4EA0A075B759 164 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 TRAV38-1A0A0B4J264 116 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 TMEM235A6NFC5 223 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 OOEPA6NGQ2 149 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 OR2AT4A6NND4 320 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 PPIAL4DF5H284 164 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 J3QRK9 145 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 LGALS8O00214 317 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 SULT1C2O00338 296 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 MFNGO00587 321 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 F12P00748 615 aaPredicted RBP14.16□□□□□ -0.14
SNX1-203ENST00000558040 GLAP06280 429 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 MELTFP08582 738 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 PPIAL4FP0DN26 164 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 DAOP14920 347 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 EFNA4P52798 201 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 GNG2P59768 71 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 RBM39Q14498 530 aaKnown RBP14.16□□□□□ -0.14
SNX1-203ENST00000558040 PDCD1Q15116 288 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 KCNJ8Q15842 424 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 SIGIRRQ6IA17 410 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 C6orf201Q7Z4U5 140 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 TGIF2LYQ8IUE0 185 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 Q8N402 240 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 SMIM4Q8WVI0 70 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 FCAMRQ8WWV6 532 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 IGFBPL1Q8WX77 278 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 ZMAT3Q9HA38 289 aaKnown RBP14.16□□□□□ -0.14
SNX1-203ENST00000558040 SCPEP1Q9HB40 452 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 PPIAL4AQ9Y536 164 aa14.16□□□□□ -0.14
SNX1-203ENST00000558040 TANC2Q9HCD6 1990 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms