RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IGLV11-55A0A075B6I3 123 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 KRTAP16-1A8MUX0 517 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 UPK1AO00322 258 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 SS18L1O75177 396 aaPredicted RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 PDCD6O75340 191 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 CA11O75493 328 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 CNMDO75829 334 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 GATBO75879 557 aaKnown RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 KRT75O95678 551 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 IFNA16P05015 189 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 OR4Q2P0C623 313 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 CECR9P0C854 216 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 ZNF883P0CG24 379 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 CFL1P23528 166 aaKnown RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 PRTN3P24158 256 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 PYCR1P32322 319 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 NUDT1P36639 197 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 CTRLP40313 264 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 IDH3GP51553 393 aaPredicted RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 RAB25P57735 213 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 C1QTNF8P60827 252 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 IGLV3-21P80748 117 aaPredicted RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 GTF2BQ00403 316 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 PDK2Q15119 407 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 C14orf177Q52M58 125 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 TTMPQ5BVD1 217 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 TCTEX1D4Q5JR98 221 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 IL34Q6ZMJ4 242 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 MTERF4Q7Z6M4 381 aaKnown RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 C11orf53Q8IXP5 236 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 OR4M1Q8NGD0 313 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 OR5B17Q8NGF7 314 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 ASB13Q8WXK3 278 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 PPCDCQ96CD2 204 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 TLCD1Q96CP7 247 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 OPTNQ96CV9 577 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 BMFQ96LC9 184 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 SPACA5Q96QH8 159 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 BCL2L14Q9BZR8 327 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 MS4A6AQ9H2W1 248 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 OR51B6Q9H340 312 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 POMKQ9H5K3 350 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 NANOGQ9H9S0 305 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 SAMHD1Q9Y3Z3 626 aaKnown RBP2.69□□□□□ -1.98
TDP1-217ENST00000557782 GTF3C1Q12789 2109 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 MN1Q10571 1320 aaPredicted RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 IGHV1OR15-9A0A0B4J2B8 117 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 IGHV5-51A0A0C4DH38 117 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 A0A0G2JMP0 313 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 A0A0X1KG70 313 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 LOC389332A0A1B0GUA5 103 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 FAM183AA6NL82 134 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CD300LBA8K4G0 201 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 H3BP45 60 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 BCL2L11O43521 198 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CHST10O43529 356 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 SLC37A4O43826 429 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 EIF1BO60739 113 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 ZNF189O75820 626 aaPredicted RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR2A4O95047 310 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 TCRBP04435 133 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 SNRPAP09012 282 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 HIST1H1EP10412 219 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 M6PRP20645 277 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 RPL12P30050 165 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 AGTR1P30556 359 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 EIF1P41567 113 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 CAPZBP47756 277 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 ZNF136P52737 540 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR4D2P58180 307 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CXCR4P61073 352 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 LSM6P62312 80 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 RAP1AP62834 184 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 SMAGPQ0VAQ4 97 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 SRSF6Q13247 344 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 ZNF404Q494X3 552 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 MPV17L2Q567V2 206 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 UBE2NLQ5JXB2 153 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 TSPO2Q5TGU0 170 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 OTPQ5XKR4 325 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 ZNF530Q6P9A1 599 aaPredicted RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 CALHM1Q8IU99 346 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 MUC15Q8N387 334 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 GATD1Q8NB37 220 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR4C13Q8NGP0 309 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR6K3Q8NGY3 331 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR52P1PQ8NH57 321 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 COQ8AQ8NI60 647 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 PHOSPHO2Q8TCD6 241 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 HAVCR2Q8TDQ0 301 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 ORAOV1Q8WV07 137 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 RDH5Q92781 318 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 NEURL3Q96EH8 262 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 PPP1R36Q96LQ0 422 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR2A7Q96R45 310 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 NRTNQ99748 197 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CHAC1Q9BUX1 264 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 TBL1XR1Q9BZK7 514 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 TSGA10Q9BZW7 698 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 FBXL15Q9H469 300 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms