RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CHST6Q9GZX3 395 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ZNF702PQ9H963 129 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 RBFOX1Q9NWB1 397 aaKnown RBP11.83□□□□□ -0.52
SHMT2-235ENST00000557740 IL36RNQ9UBH0 155 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 GLS2Q9UI32 602 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 A0A0G2JK05 382 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 PEX14O75381 377 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 IGHA1P01876 353 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 OPN1MWP04001 364 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 OPN1MW2P0DN77 364 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 OPN1MW3P0DN78 364 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 PRKACAP17612 351 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 BCL3P20749 454 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 RAB13P51153 203 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 SNU13P55769 128 aaKnown RBP11.82□□□□□ -0.52
SHMT2-235ENST00000557740 MTCP1P56278 107 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 ACTA2P62736 377 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 ACTG2P63267 376 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 ARSJQ5FYB0 599 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-235ENST00000557740 SPIN3Q5JUX0 258 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 HIST2H2BDQ6DRA6 164 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 LHFPL2Q6ZUX7 228 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 UTS2BQ765I0 119 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 TCF23Q7RTU1 214 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 TPRX1Q8N7U7 411 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 OR2G2Q8NGZ5 317 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 RNFT2Q96EX2 444 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 ADAT3Q96EY9 351 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-235ENST00000557740 SEBOXQ9HB31 216 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-235ENST00000557740 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
SHMT2-235ENST00000557740 IGHV2-26A0A0B4J1V2 119 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 A6NDX4 124 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 MGST3O14880 152 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 ENTPD6O75354 484 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 FBXO24O75426 580 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 HTR1AP08908 422 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 ATF1P18846 271 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 AZGP1P25311 298 aaKnown RBP11.81□□□□□ -0.52
SHMT2-235ENST00000557740 DUSP1P28562 367 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 NPBWR2P48146 333 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 SLC34A1Q06495 639 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 MINOS1Q5TGZ0 78 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 KCTD20Q7Z5Y7 419 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 Q8N2B8 174 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 TRUB1Q8WWH5 349 aaKnown RBP11.81□□□□□ -0.52
SHMT2-235ENST00000557740 SPSB1Q96BD6 273 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 FGGYQ96C11 551 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 PCDHGB5Q9Y5G0 923 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 MINOS1-NBL1R4GNA1 71 aa11.81□□□□□ -0.52
SHMT2-235ENST00000557740 IGKV1-9A0A0C4DH69 117 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 MEGF11A6BM72 1044 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 H3BUI4 141 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 SIRPB1O00241 398 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 SLC16A6O15403 523 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 PSPNO60542 156 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 ALDOBP05062 364 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 CALCBP10092 127 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 DYNLT3P51808 116 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 P2RX3P56373 397 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 HABP2Q14520 560 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-235ENST00000557740 ZNF146Q15072 292 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 NSUN5P1Q3KNT7 163 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 CCBE1Q6UXH8 406 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-235ENST00000557740 ZBTB49Q6ZSB9 765 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 OR4S1Q8NGB4 309 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 OR52N4Q8NGI2 321 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 OR13C3Q8NGS6 347 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 PYDC1Q8WXC3 89 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 MRPL48Q96GC5 212 aaKnown RBP11.8□□□□□ -0.52
SHMT2-235ENST00000557740 OPALINQ96PE5 141 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 CLEC7AQ9BXN2 247 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 EXOSC4Q9NPD3 245 aaKnown RBP11.8□□□□□ -0.52
SHMT2-235ENST00000557740 SERTAD4Q9NUC0 356 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 HHLA2Q9UM44 414 aa11.8□□□□□ -0.52
SHMT2-235ENST00000557740 TRGV10A0A0A0MS01 117 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 FUOMA2VDF0 154 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 SNTNA6NMZ2 147 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 G3V4G9 280 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 EI24O14681 340 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 SH2D1BO14796 132 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 ISG15P05161 165 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 ALPLP05186 524 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 OR3A1P47881 315 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 NANOS3P60323 173 aaKnown RBP11.79□□□□□ -0.52
SHMT2-235ENST00000557740 SNRPGP62308 76 aaKnown RBP11.79□□□□□ -0.52
SHMT2-235ENST00000557740 PDZK1IP1Q13113 114 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 IL18R1Q13478 541 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 LDLRAD2Q5SZI1 272 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 MEDAGQ5VYS4 303 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 FDX2Q6P4F2 183 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 LYG1Q8N1E2 194 aa11.79□□□□□ -0.52
SHMT2-235ENST00000557740 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms