RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 SNRPD2P62316 118 aaKnown RBP12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 ACTG1P63261 375 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 IKZF1Q13422 519 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 PDCD1Q15116 288 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 SPIN3Q5JUX0 258 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 FAM209AQ5JX71 171 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 FIP1L1Q6UN15 594 aaKnown RBP12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 MUC15Q8N387 334 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 CHPT1Q8WUD6 406 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 FBXW5Q969U6 566 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 ERGIC1Q969X5 290 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 CYYR1Q96J86 154 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 C11orf54Q9H0W9 315 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 TAS2R8Q9NYW2 309 aa12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 RCC2Q9P258 522 aaKnown RBP12.22□□□□□ -0.45
ARHGEF40-208ENST00000557498 ANKRD20A5PA0PJZ0 165 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 SRRM5B3KS81 715 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 WNT9BO14905 357 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 TPD52L2O43399 206 aaKnown RBP12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 GOSR1O95249 250 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 EGR1P18146 543 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 TNFRSF1AP19438 455 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 FUT3P21217 361 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 GLRA1P23415 457 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 DUSP1P28562 367 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 RCVRNP35243 200 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 GMFBP60983 142 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 SRSF1Q07955 248 aaKnown RBP eCLIP12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 OXA1LQ15070 435 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 PCGF3Q3KNV8 242 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 ATAD3CQ5T2N8 411 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 ACP7Q6ZNF0 438 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 CENPSQ8N2Z9 138 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 MINDY2Q8NBR6 621 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 Q8TCH9 128 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 COX4I2Q96KJ9 171 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 SULT4A1Q9BR01 284 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 C7orf50Q9BRJ6 194 aaKnown RBP12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 IFT22Q9H7X7 185 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 SPACA1Q9HBV2 294 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 GCM1Q9NP62 436 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 RASL12Q9NYN1 266 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 RALYQ9UKM9 306 aaKnown RBP12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 ANAPC10Q9UM13 185 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 PLEKHA6Q9Y2H5 1048 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 CACNG2Q9Y698 323 aa12.21□□□□□ -0.45
ARHGEF40-208ENST00000557498 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.46
ARHGEF40-208ENST00000557498 IGSF10Q6WRI0 2623 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 A6NNC1 897 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 HS3ST1O14792 307 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 LYRM1O43325 122 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 KNG1P01042 644 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 CSF1P09603 554 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 CBX5P45973 191 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 CCL8P80075 99 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 DYRK1AQ13627 763 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 ZNF146Q15072 292 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 TRIM16LQ309B1 348 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 SMIM21Q3B7S5 101 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 MZT2BQ6NZ67 158 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 Q6P435 159 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 OR11L1Q8NGX0 322 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 FAAP24Q9BTP7 215 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 IFT46Q9NQC8 304 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 ZNF107Q9UII5 783 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 AK3Q9UIJ7 227 aa12.2□□□□□ -0.46
ARHGEF40-208ENST00000557498 CENPXA8MT69 81 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 DEGS1O15121 323 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 SSX4O60224 188 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 ZNF44P15621 663 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 RFX2P48378 723 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 PPOXP50336 477 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 TAS2R19P59542 299 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 DCDC5Q6ZRR9 648 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 GDPD3Q7L5L3 318 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 FAM90A1Q86YD7 464 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 ZCCHC24Q8N2G6 241 aaKnown RBP12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 GCSAMQ8N6F7 178 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 TMEM229BQ8NBD8 167 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 SPOCK3Q9BQ16 436 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 CMSS1Q9BQ75 279 aaKnown RBP12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 HRASLSQ9HDD0 168 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 CBLN4Q9NTU7 201 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 DECR2Q9NUI1 292 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 FAIMQ9NVQ4 179 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 RNF7Q9UBF6 113 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 GLS2Q9UI32 602 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 FBXO9Q9UK97 447 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 NPTNQ9Y639 398 aa12.19□□□□□ -0.46
ARHGEF40-208ENST00000557498 TRAV24A0A0B4J272 114 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms