RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 HOXA5P20719 270 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 OPRM1P35372 400 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 SRSF7Q16629 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 SLC22A25Q6T423 547 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 TMEM182Q6ZP80 229 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 FBXL14Q8N1E6 418 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 REEP6Q96HR9 211 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 ULBP2Q9BZM5 246 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 SH3BGRL3Q9H299 93 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 SIRT7Q9NRC8 400 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 FAM86C1Q9NVL1 165 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 DMRT1Q9Y5R6 373 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 MKI67P46013 3256 aaKnown RBP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 RALGAPA1Q6GYQ0 2036 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 KNL1Q8NG31 2342 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 A0A1W2PPE2 198 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 TRDCB7Z8K6 153 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 PPIHO43447 177 aaKnown RBP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 PDCD6O75340 191 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 CD63P08962 238 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 DAOP14920 347 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 FHITP49789 147 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 RRADP55042 308 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 FXYD4P59646 89 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 RND3P61587 244 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 NHLH2Q02577 135 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 BAXQ07812 192 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 MALLQ13021 153 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 CHAF1BQ13112 559 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 PHLDA2Q53GA4 152 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 PHYHD1Q5SRE7 291 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 Q6ZS49 121 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 C20orf196Q8IYI0 205 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 OR5L1Q8NGL2 311 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 MUCL1Q96DR8 90 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 SF3B5Q9BWJ5 86 aaKnown RBP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 RBM24Q9BX46 236 aaKnown RBP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 TOLLIPQ9H0E2 274 aa14.13□□□□□ -0.15
SHMT2-231ENST00000557433 CHCHD2Q9Y6H1 151 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-231ENST00000557433 CCDC187A0A096LP49 1063 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 YKT6O15498 198 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 TXNL1O43396 289 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 SCRG1O75711 98 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 HBE1P02100 147 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 ARG1P05089 322 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 CST2P09228 141 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 OR13C7P0DN81 318 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
SHMT2-231ENST00000557433 FUT6P51993 359 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 FOXL2P58012 376 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 EXT1Q16394 746 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 DMRTC1Q5HYR2 192 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 GPR137CQ8N3F9 429 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 OR10AD1Q8NGE0 317 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 OR2G3Q8NGZ4 309 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 RBMXL1Q96E39 390 aaKnown RBP14.12□□□□□ -0.15
SHMT2-231ENST00000557433 TMEM56Q96MV1 263 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 PAPOLGQ9BWT3 736 aaKnown RBP14.12□□□□□ -0.15
SHMT2-231ENST00000557433 RARRES3Q9UL19 164 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 TMEM56-RWDD3S4R434 201 aa14.12□□□□□ -0.15
SHMT2-231ENST00000557433 TRAV20A0A0B4J274 112 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 C3orf85A0A1B0GTC6 90 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A10PA6NDY2 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A8PA6NJQ4 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A7PA6NKC0 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A22PA8MWA6 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A23PA8MXZ1 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 ZNF732B4DXR9 585 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 MPPED1O15442 326 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 C1QL1O75973 258 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 HSPB1P04792 205 aaKnown RBP14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 TCN2P20062 427 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 NKX2-1P43699 371 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-231ENST00000557433 HTR5AP47898 357 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 CDX1P47902 265 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-231ENST00000557433 RGS19P49795 217 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 OR2B8PP59922 312 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 KRTAP27-1Q3LI81 207 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 CLEC9AQ6UXN8 241 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 SLC35G3Q8N808 338 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 SPSB2Q99619 263 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 TMEM222Q9H0R3 208 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 LYRM2Q9NU23 88 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-231ENST00000557433 TINAGQ9UJW2 476 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 SLC7A11Q9UPY5 501 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 CLEC18AA5D8T8 446 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 GJE1A6NN92 205 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 SYNGR3O43761 229 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 ANGPTL7O43827 346 aa14.11□□□□□ -0.15
SHMT2-231ENST00000557433 NRASP01111 189 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms