RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 C2CD4CQ8TF44 421 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 OR5P3Q8WZ94 311 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 Q96M85 177 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 C18orf15Q96N68 181 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 RASL11BQ9BPW5 248 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 BARHL1Q9BZE3 327 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 ROPN1BQ9BZX4 212 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-245ENST00000556958 POLR2J2Q9GZM3 115 aaKnown RBP4.35□□□□□ -1.71
ATXN3-245ENST00000556958 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 NSRP1Q9H0G5 558 aaKnown RBP4.35□□□□□ -1.71
ATXN3-245ENST00000556958 POLR2J3Q9H1A7 115 aaKnown RBP4.35□□□□□ -1.71
ATXN3-245ENST00000556958 TMEM38AQ9H6F2 299 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 PPCSQ9HAB8 311 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 ROPN1Q9HAT0 212 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-245ENST00000556958 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 SLC2A8Q9NY64 477 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 ETAA1Q9NY74 926 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 CYB5R1Q9UHQ9 305 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 LINC00312Q9Y6C7 94 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 COMMD3-BMI1R4GMX3 469 aa4.35□□□□□ -1.71
ATXN3-245ENST00000556958 TRAV27A0A087WT01 109 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 MEX3AA1L020 520 aaKnown RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 LY6LH3BQJ8 138 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 M0QX08 132 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 CST4P01036 141 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 IGLV1-47P01700 117 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 TROVE2P10155 538 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 IFI30P13284 250 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 OTX1P32242 354 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 DCTDP32321 178 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 PRKXP51817 358 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 CD81P60033 236 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 GNG3P63215 75 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 EWSR1Q01844 656 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 RAB40BQ12829 278 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 PRDX4Q13162 271 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 KRR1Q13601 381 aaKnown RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 EIF2B1Q14232 305 aaKnown RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 GALEQ14376 348 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 RBM39Q14498 530 aaKnown RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 ZNF645Q8N7E2 425 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 ANKRD42Q8N9B4 389 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 SYT8Q8NBV8 401 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 FAM156AQ8NDB6 213 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 OR56B4Q8NH76 319 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 RASSF5Q8WWW0 418 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 LZICQ8WZA0 190 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 TOMM40LQ969M1 308 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 REEP6Q96HR9 211 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 OR8B4Q96RC9 309 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 NEURL2Q9BR09 285 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 THAP7Q9BT49 309 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 COPS4Q9BT78 406 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 TOLLIPQ9H0E2 274 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 KLK15Q9H2R5 256 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 OR51I2Q9H344 312 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 GAL3ST2Q9H3Q3 398 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 SRD5A3Q9H8P0 318 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 VIPAS39Q9H9C1 493 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 AIG1Q9NVV5 245 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 ENPP5Q9UJA9 477 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 RIMS3Q9UJD0 308 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 CORO2BQ9UQ03 480 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 SLC22A13Q9Y226 551 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 SIGLEC7Q9Y286 467 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 PIGLQ9Y2B2 252 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 ADAM18Q9Y3Q7 739 aa4.34□□□□□ -1.71
ATXN3-245ENST00000556958 AMMECR1Q9Y4X0 333 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-245ENST00000556958 DNAH17Q9UFH2 4485 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 C9orf118A6NHY6 69 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 EFCAB9A8MZ26 197 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 EVPLLA8MZ36 301 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 DLGAP1O14490 977 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 NXPH2O95156 264 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 IGKV1D-33P01593 117 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 IGKV1-33P01594 117 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 HLA-DQA2P01906 255 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 APOC1P02654 83 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 LGALS1P09382 135 aaKnown RBP4.33□□□□□ -1.72
ATXN3-245ENST00000556958 SLC2A1P11166 492 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 CD34P28906 385 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 SOX6P35712 828 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 SLC15A1P46059 708 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 OR1E2P47887 323 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 NPBWR2P48146 333 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 RAB7AP51149 207 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 GPM6AP51674 278 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 KPNB1Q14974 876 aaKnown RBP4.33□□□□□ -1.72
ATXN3-245ENST00000556958 ODF1Q14990 250 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 RBMS2Q15434 407 aaKnown RBP4.33□□□□□ -1.72
ATXN3-245ENST00000556958 TATDN3Q17R31 274 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 LGALS9BQ3B8N2 356 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 ZBED5Q49AG3 693 aa4.33□□□□□ -1.72
ATXN3-245ENST00000556958 FAM53AQ6NSI3 398 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms