RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SYNPRQ8TBG9 265 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TMEM174Q8WUU8 243 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 PP6455Q8WZ26 134 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 FLYWCH2Q96CP2 140 aaKnown RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 ZG16BQ96DA0 208 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 ADTRPQ96IZ2 230 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TSSK2Q96PF2 358 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 MS4A10Q96PG2 267 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TBX15Q96SF7 602 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 GABARAPL1Q9H0R8 117 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 FNDC4Q9H6D8 234 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 GREM2Q9H772 168 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TBC1D17Q9HA65 648 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 AIG1Q9NVV5 245 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TAS2R16Q9NYV7 291 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 KCNIP1Q9NZI2 227 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 SLC7A7Q9UM01 511 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 EXO1Q9UQ84 846 aaKnown RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 MTCL1Q9Y4B5 1905 aaKnown RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 MYH10P35580 1976 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 FXYD6-FXYD2A0A087WZ82 144 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 A0A0G2JLM5 398 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 KIR2DS5A0A0G2JLQ3 304 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 A0A0G2JNG1 304 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 A0A1B0GUS0 222 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 LOC285095A0A1B0GVY8 99 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 A0A1B0GW64 132 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 A6NDN8 102 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 MEIS3P1A6NDR6 274 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 ANTXRLA6NF34 631 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 FABP5P3A8MUU1 101 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 E9PLN8 166 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 F5H6K3 240 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 NKX2-8O15522 239 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 PRICKLE3O43900 615 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 OR7C1O76099 320 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 MT-CO3P00414 261 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 TIMP1P01033 207 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 IFNW1P05000 195 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 GNB3P16520 340 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 FGF9P31371 208 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 PRDX2P32119 198 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 ARL2P36404 184 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 RPL3P39023 403 aaKnown RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 WASP42768 502 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 CX3CR1P49238 355 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 CLDN15P56746 228 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 UBE2NP61088 152 aaKnown RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 LCN6P62502 163 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 PLP2Q04941 152 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 ZNF266Q14584 549 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 KIR2DS5Q14953 304 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 FAM102AQ5T9C2 384 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 LYPLAL1Q5VWZ2 237 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 GLDNQ6ZMI3 551 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 IL17RELQ6ZVW7 336 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 ZNF571Q7Z3V5 609 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 MAVSQ7Z434 540 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 TMEM123Q8N131 208 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 TOMM5Q8N4H5 51 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 LILRA3Q8N6C8 439 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 OR10S1Q8NGN2 331 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 OR2T27Q8NH04 317 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 OR4F5Q8NH21 305 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 OR4A16Q8NH70 328 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 ZNRF2Q8NHG8 242 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 SCAMP4Q969E2 229 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 WBP2Q969T9 261 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 RNF183Q96D59 192 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 MS4A6EQ96DS6 147 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 ZNF471Q9BX82 626 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 C1QTNF4Q9BXJ3 329 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 SMIM3Q9BZL3 60 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 DPY30Q9C005 99 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 TMEM39BQ9GZU3 492 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 FXYD6Q9H0Q3 95 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 OR10A2Q9H208 303 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 KCNK15Q9H427 330 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 MAGIXQ9H6Y5 334 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 AMBNQ9NP70 447 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 SIX2Q9NPC8 291 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 TMEM9BQ9NQ34 198 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 PARP11Q9NR21 331 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 JKAMPQ9P055 326 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 GALPQ9UBC7 116 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 TESQ9UGI8 421 aaKnown RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 PLIN4Q96Q06 1357 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 OTOFQ9HC10 1997 aa5.38□□□□□ -1.55
TDP1-215ENST00000556498 MED1Q15648 1581 aaPredicted RBP5.38□□□□□ -1.55
TDP1-215ENST00000556498 TRBV24-1A0A075B6N3 115 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 CENPVL1A0A0U1RR11 272 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 FAM90A20PA6NIJ5 464 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 SH2D7A6NKC9 451 aaPredicted RBP5.37□□□□□ -1.55
TDP1-215ENST00000556498 ZNF785A8K8V0 405 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 F8VVB4 439 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 F8VWA3 439 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 H3BQ15 152 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 J3KT08 172 aa5.37□□□□□ -1.55
TDP1-215ENST00000556498 GAPDHSO14556 408 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms