RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TM2D1Q9BX74 207 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 KCNK15Q9H427 330 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 HES4Q9HCC6 221 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 BEX4Q9NWD9 120 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-220ENST00000555634 TREM2Q9NZC2 230 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 PPIAL4AQ9Y536 164 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 IGKV1-12A0A0C4DH73 117 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 FABP12A6NFH5 140 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 OR2AT4A6NND4 320 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 SERPINE3A8MV23 424 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 MCRIP1C9JLW8 97 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 TMEM178BH3BS89 294 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 H7C1Q1 480 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 OVOL3O00110 214 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 LGALS8O00214 317 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 NDUFS8O00217 210 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 DEGS1O15121 323 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PPIHO43447 177 aaKnown RBP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PDCD6O75340 191 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 TPPPO94811 219 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 HAND1O96004 215 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 IGKV1D-12P01611 117 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 ELK1P19419 428 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PTBP1P26599 531 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 BLVRBP30043 206 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 GABRA2P47869 451 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 NPBWR2P48146 333 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 KCNJ3P48549 501 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 INPP1P49441 399 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 VEGFCP49767 419 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 GNG2P59768 71 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 MRPS10P82664 201 aaKnown RBP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF45Q02386 682 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 SCN1BQ07699 218 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF146Q15072 292 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PIGYQ3MUY2 71 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 OR10K2Q6IF99 312 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 CNIH2Q6PI25 160 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 METAP1DQ6UB28 335 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 SLC36A1Q7Z2H8 476 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 C1QL2Q7Z5L3 287 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF561Q8N587 486 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 GCSAMQ8N6F7 178 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 ASCC1Q8N9N2 400 aaKnown RBP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 TMEM104Q8NE00 496 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 OR6Q1Q8NGQ2 317 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 OR10R2Q8NGX6 335 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 SLC25A38Q96DW6 304 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PERPQ96FX8 193 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 C1orf147Q96MC9 270 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF488Q96MN9 340 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 DNTTIP1Q9H147 329 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PLEKHJ1Q9NW61 149 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PCDHB10Q9UN67 800 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 WIPI2Q9Y4P8 454 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 PTPN13Q12923 2485 aa9.43□□□□□ -0.9
SHMT2-220ENST00000555634 FUOMA2VDF0 154 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 GEMIN2O14893 280 aaKnown RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 LDLRAD4O15165 306 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 XRCC3O43542 346 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 SSX4O60224 188 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 FSTL3O95633 263 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 EIF4EP06730 217 aaKnown RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 GSTP1P09211 210 aaKnown RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 FUT3P21217 361 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 CDK2P24941 298 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 GPR6P46095 362 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 PTH2RP49190 550 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 TMEM33P57088 247 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 ERVK11-1P61568 191 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 IL13RA1P78552 427 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 QRFPP83859 136 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 ARFRP1Q13795 201 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF846Q147U1 533 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 TAF9Q16594 264 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 PAN3Q58A45 887 aaKnown RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 PYHIN1Q6K0P9 492 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 CMTM4Q8IZR5 234 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 Q8NFD4 153 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 FAM168AQ92567 244 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 MED30Q96HR3 178 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 GSX2Q9BZM3 304 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 LPAR5Q9H1C0 372 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF665Q9H7R5 613 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 CHMP1AQ9HD42 196 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 IFT46Q9NQC8 304 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 MRPS7Q9Y2R9 242 aaKnown RBP9.42□□□□□ -0.9
SHMT2-220ENST00000555634 LRBAP50851 2863 aa9.42□□□□□ -0.9
SHMT2-220ENST00000555634 TRAV18A0A075B6X5 111 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 IGHV3OR15-7A0A075B7D8 119 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 A0A1W2PP11 408 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 SIRPB1O00241 398 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 CTDSP2O14595 271 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 WNT9BO14905 357 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 TMPRSS2O15393 492 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 LHBP01229 141 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 GLAP06280 429 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms