RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TESK1Q15569 626 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 PNLIPRP3Q17RR3 467 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 MPV17LQ2QL34 196 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 MST1LQ2TV78 715 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 NHLRC3Q5JS37 347 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 OLFML2AQ68BL7 652 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 C6orf201Q7Z4U5 140 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 TRAPPC6BQ86SZ2 158 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 ZCCHC24Q8N2G6 241 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 TOMM5Q8N4H5 51 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 OR11L1Q8NGX0 322 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 OR10Z1Q8NGY1 313 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 TRIM63Q969Q1 353 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 SEH1LQ96EE3 360 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 POM121Q96HA1 1249 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 NRIP2Q9BQI9 281 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 SCPEP1Q9HB40 452 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 KLK11Q9UBX7 282 aa8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 KLF2Q9Y5W3 355 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-220ENST00000555585 UBE2QL1A1L167 161 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 A6NNC1 897 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 H3BUI4 141 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 H7C417 338 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 MFNGO00587 321 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 HS3ST1O14792 307 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 DEGS1O15121 323 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 ECDO95905 644 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 LPLP06858 475 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 CD55P08174 381 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 ADH4P08319 380 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 MELTFP08582 738 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 IRF2P14316 349 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 ZNF44P15621 663 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 FUT3P21217 361 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 CHATP28329 748 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 PMELP40967 661 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 GATA4P43694 442 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 MRPS15P82914 257 aaKnown RBP8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 SWI5Q1ZZU3 235 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 PCGF3Q3KNV8 242 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 FAM209AQ5JX71 171 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 AGAP6Q5VW22 663 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 SIGIRRQ6IA17 410 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 ACP7Q6ZNF0 438 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 DCDC5Q6ZRR9 648 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 LINC00596Q86U02 117 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 SETD6Q8TBK2 473 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 NEK7Q8TDX7 302 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 GPX8Q8TED1 209 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 ERGIC1Q969X5 290 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 VRK1Q99986 396 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 FAAP24Q9BTP7 215 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 UBTD1Q9HAC8 227 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 IFT46Q9NQC8 304 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 CBLN4Q9NTU7 201 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 FAIMQ9NVQ4 179 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 TREM2Q9NZC2 230 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 ZNF581Q9P0T4 197 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 RNF7Q9UBF6 113 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 MTFP1Q9UDX5 166 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 OR14J1Q9UGF5 321 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 GLS2Q9UI32 602 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 TBC1D24Q9ULP9 559 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 HSF4Q9ULV5 492 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 PPP1R3CQ9UQK1 317 aa8.15□□□□□ -1.1
HNRNPC-220ENST00000555585 CFAP46Q8IYW2 2715 aa8.15□□□□□ -1.11
HNRNPC-220ENST00000555585 ANKRD20A5PA0PJZ0 165 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 CENPXA8MT69 81 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SERPINE3A8MV23 424 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 MCRIP1C9JLW8 97 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SIRPB1O00241 398 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SH2D1BO14796 132 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 PLA2G10O15496 165 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 CSF1P09603 554 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 EGR1P18146 543 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 CD80P33681 288 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 RBMXP38159 391 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 CBX5P45973 191 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 AP3S2P59780 193 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 ACTBP60709 375 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 ACTG1P63261 375 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SSBP1Q04837 148 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SRSF1Q07955 248 aaKnown RBP eCLIP8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 ASAH1Q13510 395 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 TRIM16LQ309B1 348 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SMIM21Q3B7S5 101 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SPIN3Q5JUX0 258 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 DNM1P46Q6ZS02 220 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 ST8SIA4Q92187 359 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 CYYR1Q96J86 154 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 CMSS1Q9BQ75 279 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 SULT4A1Q9BR01 284 aa8.14□□□□□ -1.11
HNRNPC-220ENST00000555585 WDR13Q9H1Z4 485 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms