RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 BBOF1Q8ND07 529 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 OR6K3Q8NGY3 331 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 TWIST2Q8WVJ9 160 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 TFGQ92734 400 aaPredicted RBP0.53□□□□□ -2.32
SRP54-207ENST00000555535 MAL2Q969L2 176 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 APOBEC3DQ96AK3 386 aaPredicted RBP0.53□□□□□ -2.32
SRP54-207ENST00000555535 OPALINQ96PE5 141 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 LINC01587Q99440 93 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 C20orf144Q9BQM9 153 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 CHRNA10Q9GZZ6 450 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 SLC38A1Q9H2H9 487 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 ASB7Q9H672 318 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 ARMC7Q9H6L4 198 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 TUBA4BQ9H853 241 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 RDH14Q9HBH5 336 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 ZNF286AQ9HBT8 521 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 C6orf50Q9HD87 102 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 KLF12Q9Y4X4 402 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 MROH5Q6ZUA9 1318 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 IGKV1D-37A0A075B6S9 117 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 IGHV3-21A0A0B4J1V1 117 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 TRAV25A0A0B4J276 109 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 IGHV2OR16-5A0A0B4J2B6 119 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 FNDC10F2Z333 226 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 F5H5P2 479 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 H3BP45 60 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CASQ2O14958 399 aaPredicted RBP0.52□□□□□ -2.33
SRP54-207ENST00000555535 SOD3P08294 240 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CGB3P0DN86 165 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CGB7P0DN87 165 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 LIPCP11150 499 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 PTHLHP12272 177 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 ANXA8P13928 327 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 GTF2F2P13984 249 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 GABRA1P14867 456 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CTLA4P16410 223 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 MAGEA1P43355 309 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 HCCSP53701 268 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CCL23P55773 120 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CLDN6P56747 220 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 PSG4Q00888 419 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 NDUFAF6Q330K2 333 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CEACAM21Q3KPI0 293 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 MRPL2Q5T653 305 aaKnown RBP0.52□□□□□ -2.33
SRP54-207ENST00000555535 FAM27D1Q5T7N8 215 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 ANXA8L1Q5VT79 327 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 NXNL2Q5VZ03 156 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 PLCXD3Q63HM9 321 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 SLC25A25Q6KCM7 469 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 Q6ZQT7 251 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 DPPA2Q7Z7J5 298 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 TMEM25Q86YD3 366 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 APRG1Q8IVJ8 170 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 ATPAF2Q8N5M1 289 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 ZNF555Q8NEP9 628 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 BPIFB6Q8NFQ5 453 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR11G2Q8NGC1 345 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR10Z1Q8NGY1 313 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR2V1Q8NHB1 315 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CLHC1Q8NHS4 586 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR8D1Q8WZ84 308 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CERS2Q96G23 380 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 FMC1Q96HJ9 113 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 ADTRPQ96IZ2 230 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR2M4Q96R27 311 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR52B2Q96RD2 323 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 MYCBPQ99417 103 aaPredicted RBP0.52□□□□□ -2.33
SRP54-207ENST00000555535 TXNDC17Q9BRA2 123 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 IQCGQ9H095 443 aaKnown RBP0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR51B5Q9H339 312 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 CHRAC1Q9NRG0 131 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 SDHAF3Q9NRP4 125 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 KCNIP2Q9NS61 270 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 RBM12B-AS1Q9P1G2 102 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 OR5V1Q9UGF6 321 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 BTRCQ9Y297 605 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 RHBDD3Q9Y3P4 386 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 KPTNQ9Y664 436 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 URGCP-MRPS24S4R325 110 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 BRD4O60885 1362 aaPredicted RBP0.52□□□□□ -2.33
SRP54-207ENST00000555535 COL4A1P02462 1669 aa0.52□□□□□ -2.33
SRP54-207ENST00000555535 MDC1Q14676 2089 aaKnown RBP0.52□□□□□ -2.33
SRP54-207ENST00000555535 TRAV8-7A0A075B6U6 113 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 A0A1B0GTI1 187 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 VPS37CA5D8V6 355 aaPredicted RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 TVP23AA6NH52 213 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 TRIM64CA6NLI5 447 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 CENPXA8MT69 81 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 ZNF99A8MXY4 864 aaPredicted RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 TRAPPC3O43617 180 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 PLEKHA8P1O95397 391 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 NSD2O96028 1365 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 SNRPAP09012 282 aaKnown RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 SCGB1C2P0DMR2 95 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 OR12D1P0DN82 309 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 IL12BP29460 328 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 MAGEA6P43360 314 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 SLC35B1P78383 322 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 BNIP2Q12982 314 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 TRDNQ13061 729 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms