RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CPNE2Q96FN4 548 aaPredicted RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 AJUBAQ96IF1 538 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 CDCA4Q9BXL8 241 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 RAB18Q9NP72 206 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 FGF20Q9NP95 211 aaPredicted RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 SMPD3Q9NY59 655 aaPredicted RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 TBL2Q9Y4P3 447 aaKnown RBP9.64□□□□□ -0.87
VRK1-204ENST00000555351 RNF114Q9Y508 228 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 PCDHGB5Q9Y5G0 923 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 LINC00312Q9Y6C7 94 aa9.64□□□□□ -0.87
VRK1-204ENST00000555351 IRGMA1A4Y4 181 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 VGLL3A8MV65 326 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 H3BSH0 61 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 MGST3O14880 152 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 KDM4BO94953 1096 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 HAND1O96004 215 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 OCM2P0CE71 109 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
VRK1-204ENST00000555351 LMO1P25800 156 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 BMXP51813 675 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 GBX2P52951 348 aaPredicted RBP9.63□□□□□ -0.87
VRK1-204ENST00000555351 DLX1P56177 255 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 LGALS4P56470 323 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 ZNF273Q14593 569 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 LRRC75BQ2VPJ9 315 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 CCDC58Q4VC31 144 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 Q6ZSV7 163 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 LHFPL3Q86UP9 236 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 PNKDQ8N490 385 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 PACRGLQ8N7B6 248 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 OR4M1Q8NGD0 313 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 OR52I1Q8NGK6 324 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 OR13D1Q8NGV5 346 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 OR5AK2Q8NH90 309 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 STMN2Q93045 179 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 ZNF714Q96N38 554 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 SSX3Q99909 188 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 COMMD4Q9H0A8 199 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 ZCCHC4Q9H5U6 513 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
VRK1-204ENST00000555351 HMG20AQ9NP66 347 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 FBLN5Q9UBX5 448 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 MYRFQ9Y2G1 1151 aa9.63□□□□□ -0.87
VRK1-204ENST00000555351 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 TMEM82A0PJX8 343 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 FUOMA2VDF0 154 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 SH2D1BO14796 132 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 TIMM23O14925 209 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 SULT1B1O43704 296 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 ZFPL1O95159 310 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 CSN2P05814 226 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 CCL3L1P16619 93 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 BCL3P20749 454 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 DCKP27707 260 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 NPBWR2P48146 333 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 POU3F4P49335 361 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 EDDM3BP56851 147 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
VRK1-204ENST00000555351 TTC23Q5W5X9 447 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 ZNF626Q68DY1 528 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 CRIP3Q6Q6R5 217 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 CHST4Q8NCG5 386 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 OR51A4Q8NGJ6 313 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 OR10AC1Q8NH08 325 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 RPS4Y2Q8TD47 263 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 APH1BQ8WW43 257 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 TAF15Q92804 592 aaKnown RBP eCLIP9.62□□□□□ -0.87
VRK1-204ENST00000555351 MALSU1Q96EH3 234 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 ISG20L2Q9H9L3 353 aaKnown RBP9.62□□□□□ -0.87
VRK1-204ENST00000555351 RBFOX1Q9NWB1 397 aaKnown RBP9.62□□□□□ -0.87
VRK1-204ENST00000555351 AASSQ9UDR5 926 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 UBE2J1Q9Y385 318 aaPredicted RBP9.62□□□□□ -0.87
VRK1-204ENST00000555351 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
VRK1-204ENST00000555351 PKD1L1Q8TDX9 2849 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 H3BUX3 64 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 M0QZ24 198 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 WBP4O75554 376 aaKnown RBP9.61□□□□□ -0.87
VRK1-204ENST00000555351 BAG2O95816 211 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 LIMS3P0CW19 117 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 LIMS4P0CW20 117 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 IGHV1-8P0DP01 117 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 PRKACAP17612 351 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 GABRR1P24046 479 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 KIR2DS4P43632 304 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 DYNLT3P51808 116 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 IL18R1Q13478 541 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 GRK1Q15835 563 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 ZNF691Q5VV52 312 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 ZNF529Q6P280 563 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 RPL22L1Q6P5R6 122 aaKnown RBP9.61□□□□□ -0.87
VRK1-204ENST00000555351 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 TMPRSS11AQ6ZMR5 421 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 BATF2Q8N1L9 274 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 SETD9Q8NE22 299 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 OR52N4Q8NGI2 321 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms