RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CA13Q8N1Q1 262 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 OR13G1Q8NGZ3 307 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MYOZ3Q8TDC0 251 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 SSMEM1Q8WWF3 244 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TP53RKQ96S44 253 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 EMCNQ9ULC0 261 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TUBAL3A6NHL2 446 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM262E9PQX1 116 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TAPBPO15533 448 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 RIGQ13278 110 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TWIST1Q15672 202 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 ZCCHC14Q8WYQ9 949 aaKnown RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 STARD4Q96DR4 205 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PCGF1Q9BSM1 259 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 C19orf53Q9UNZ5 99 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MED13LQ71F56 2210 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 IGSF23A1L1A6 192 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM218A2RU14 115 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 DHRS7CA6NNS2 312 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 LANCL1O43813 399 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 HTN3P15516 51 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 CD22P20273 847 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 EMC4Q5J8M3 183 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MOGAT3Q86VF5 341 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 SPPL3Q8TCT6 385 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PLEKHA2Q9HB19 425 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 CSNK1G1Q9HCP0 422 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PLPP1O14494 284 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MMP11P24347 488 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 SLC25A30Q5SVS4 291 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 FAM222BQ8WU58 562 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PIK3IP1Q96FE7 263 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF385DQ9H6B1 395 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 P01737 135 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 DSCR4P56555 118 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 GUCA2AQ02747 115 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 HIST3H3Q16695 136 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 WDR73Q6P4I2 378 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM108Q6UXF1 575 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 LYSMD2Q8IV50 215 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 GBGT1Q8N5D6 347 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 SLC25A46Q96AG3 418 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 BEX4Q9NWD9 120 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 PIK3C2AO00443 1686 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 MBLAC1A4D2B0 266 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 IFITM10A6NMD0 228 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 HMGN4O00479 90 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 THBS4P35443 961 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 DIO1P49895 249 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 MIDNQ504T8 468 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 C1orf220Q5T0J3 134 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 HSPB8Q9UJY1 196 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 LALBAP00709 142 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 OR4E1P0C645 316 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 DCTDP32321 178 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 CSF2RBP32927 897 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 PJVKQ0ZLH3 352 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 MRPL54Q6P161 138 aaKnown RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF343Q6P1L6 599 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF738Q8NE65 137 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 HGDQ93099 445 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 GPR137Q96N19 417 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 ATOH8Q96SQ7 321 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 C12orf57Q99622 126 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 ZDHHC5Q9C0B5 715 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 AUNIPQ9H7T9 357 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 SAP30LQ9HAJ7 183 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 ERRFI1Q9UJM3 462 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 CCL21O00585 134 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 BTF3P20290 206 aaKnown RBP6.15□□□□□ -1.42
SYNE2-216ENST00000555002 METRNLQ641Q3 311 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 RNF165Q6ZSG1 346 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 OOEPA6NGQ2 149 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 MASP2O00187 686 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 PFN3P60673 137 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 RELBQ01201 579 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 MMP24Q9Y5R2 645 aa6.15□□□□□ -1.42
SYNE2-216ENST00000555002 TRAV38-1A0A0B4J264 116 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 LINC01565O15544 149 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 KLF7O75840 302 aaPredicted RBP6.15□□□□□ -1.43
SYNE2-216ENST00000555002 IGHA1P01876 353 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 IGHA2P01877 340 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 CD3DP04234 171 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 FUT3P21217 361 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 SDHBP21912 280 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 HLXQ14774 488 aaPredicted RBP6.15□□□□□ -1.43
SYNE2-216ENST00000555002 C16orf82Q7Z2V1 217 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF629Q9UEG4 869 aaPredicted RBP6.15□□□□□ -1.43
SYNE2-216ENST00000555002 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 OR2A25A4D2G3 310 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 POM121BA6NF01 834 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 ALG1L2C9J202 215 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 BCL2L11O43521 198 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 EMP1P54849 157 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 SLC37A1P57057 533 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 GPNMBQ14956 572 aa6.15□□□□□ -1.43
SYNE2-216ENST00000555002 CD226Q15762 336 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms