RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 FAM90A10PA6NDY2 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A18PA6NE21 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A16PA6NEW6 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 CCDC160A6NGH7 325 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A20PA6NIJ5 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A8PA6NJQ4 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A7PA6NKC0 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 RFPL4AA6NLU0 287 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A22PA8MWA6 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A12PA8MX19 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A5PA8MXJ8 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A23PA8MXZ1 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 RFPL4AL1F8VTS6 287 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 SH2D1BO14796 132 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 GYPAP02724 150 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A15PP0C7V4 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A13PP0C7W8 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A14PP0C7W9 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM90A24PP0C7X0 464 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 MGMTP16455 207 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 PRDX2P32119 198 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 RORCP51449 518 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 RBM11P57052 281 aaKnown RBP13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 QRFPP83859 136 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 DYNC1I2Q13409 638 aaKnown RBP13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 P2RY14Q15391 338 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 MPV17LQ2QL34 196 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 SPNS3Q6ZMD2 512 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 OR51D1Q8NGF3 324 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 CLDND2Q8NHS1 167 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 DGCR14Q96DF8 476 aaKnown RBP13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF665Q9H7R5 613 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 ABRACLQ9P1F3 81 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 ST3GAL6Q9Y274 331 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 IGHV4-61A0A0C4DH41 118 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 DPPA5A6NC42 116 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 F5H0A9 414 aaPredicted RBP13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 LDLRAD4O15165 306 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 SIGLEC5O15389 551 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 CRTAPO75718 401 aaPredicted RBP13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 CHRM2P08172 466 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 WNT2P09544 360 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 NPY4RP50391 375 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 CAV3P56539 151 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 CLDN12P56749 244 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 IL13RA1P78552 427 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 SPCS2Q15005 226 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 C2orf76Q3KRA6 126 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 BATF2Q8N1L9 274 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF561Q8N587 486 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 TMEM104Q8NE00 496 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 NEIL1Q96FI4 390 aaPredicted RBP13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 URM1Q9BTM9 101 aaKnown RBP13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 TMEM59Q9BXS4 323 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 IFT22Q9H7X7 185 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 BATF3Q9NR55 127 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 ETV7Q9Y603 341 aa13.72□□□□□ -0.21
SPTLC2-203ENST00000554901 GPR37O15354 613 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 TMPRSS2O15393 492 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 ADAM20O43506 726 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 HAND1O96004 215 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 SLC2A2P11168 524 aaPredicted RBP13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 RPS2P15880 293 aaKnown RBP13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 AMY2BP19961 511 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 RAB6AP20340 208 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 LMO1P25800 156 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 SOX6P35712 828 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 GABRA2P47869 451 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 LMO4P61968 165 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 RPS27AP62979 156 aaKnown RBP13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 UNC119Q13432 240 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 IDNKQ5T6J7 187 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 OR8B3Q8NGG8 313 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 ACOT12Q8WYK0 555 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 Q96M66 194 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 OR8B2Q96RD0 313 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 TM2D1Q9BX74 207 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM234AQ9H0X4 552 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 SPACA1Q9HBV2 294 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 IL36RNQ9UBH0 155 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 OR14J1Q9UGF5 321 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 RAB22AQ9UL26 194 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 ITPR3Q14573 2671 aa13.71□□□□□ -0.21
SPTLC2-203ENST00000554901 A0A1W2PP11 408 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 RNF223E7ERA6 249 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 MPIG6BO95866 241 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 CD177Q8N6Q3 437 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 AP3S1Q92572 193 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 GAFA1Q96PS6 74 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 CCL13Q99616 98 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 SELENOIQ9C0D9 397 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 NARFLQ9H6Q4 476 aa13.7□□□□□ -0.22
SPTLC2-203ENST00000554901 OR5V1Q9UGF6 321 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms