RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TRAPPC4Q9Y296 219 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 YARS2Q9Y2Z4 477 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CHCHD2Q9Y6H1 151 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ABCA13Q86UQ4 5058 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CMYA5Q8N3K9 4069 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TRAV40A0A0B4J280 105 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC5A10A0PJK1 596 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ISPDA4D126 451 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NCF1BA6NI72 391 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NCF1CA8MVU1 366 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 E5RI56 91 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 E7EQL1 145 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ATP6V1G2-DDX39BF2Z307 99 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 H3BNH8 94 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 DYNC1I1O14576 645 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LIN7AO14910 233 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SCAMP2O15127 329 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ERI3O43414 337 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 REM1O75628 298 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SNX4O95219 450 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ETHE1O95571 254 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 FTH1P02794 183 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RPN2P04844 631 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CSF3P09919 207 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR56A5P0C7T3 313 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 GKN3PP0CG01 181 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A16P16260 332 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 KITLGP21583 273 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 IFNA8P32881 189 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RPL22P35268 128 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 GPR6P46095 362 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 NPBWR2P48146 333 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 FABP6P51161 128 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SUCLG1P53597 346 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CTBP2P56545 445 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PLP1P60201 277 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 BTN3A2P78410 334 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LCN2P80188 198 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 XIAPP98170 497 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ARHGAP19Q14CB8 494 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PTRHD1Q6GMV3 140 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 BRD3OSQ6XYD6 125 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 DGAT2L6Q6ZPD8 337 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 C19orf35Q6ZS72 473 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A48Q6ZT89 311 aaKnown RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 C6orf120Q7Z4R8 191 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SNX20Q7Z614 316 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CAMK2N1Q7Z7J9 78 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC22A9Q8IVM8 553 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PDZD9Q8IXQ8 264 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF567Q8N184 647 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LRRC25Q8N386 305 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PQLC3Q8N755 202 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF433Q8N7K0 673 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 GATSQ8NAP1 163 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ATP6V1C2Q8NEY4 427 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR51G1Q8NGK1 321 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR52K1Q8NGK4 314 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR1J4Q8NGS1 313 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR2G2Q8NGZ5 317 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 DTX3LQ8TDB6 740 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RAD51AP1Q96B01 352 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TMIGD2Q96BF3 282 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 TPD52L3Q96J77 140 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 FAM210BQ96KR6 192 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 LINC00167Q96N53 147 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 FOPNLQ96NB1 174 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ALS2CR12Q96Q35 445 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 HBEGFQ99075 208 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SH3GL1Q99961 368 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 ECSITQ9BQ95 431 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 HDHD3Q9BSH5 251 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A39Q9BZJ4 359 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 OR51B6Q9H340 312 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 HAUS4Q9H6D7 363 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PROK2Q9HC23 129 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PRTFDC1Q9NRG1 225 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PARVAQ9NVD7 372 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 FAIMQ9NVQ4 179 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 RMND1Q9NWS8 449 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 SLC2A8Q9NY64 477 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 CFAP45Q9UL16 551 aa0.98□□□□□ -2.25
PRPF39-208ENST00000554785 PACSIN2Q9UNF0 486 aaPredicted RBP0.98□□□□□ -2.25
PRPF39-208ENST00000554785 A0A1B0GW55 424 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 XKRY2A2RUG3 117 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DPRXA6NFQ7 191 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 H7C0C1 242 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 UBXN8O00124 270 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PEX7O00628 323 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 XKRYO14609 159 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SOX15O60248 233 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CST8O60676 142 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 EEDO75530 441 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RCBTB2O95199 551 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MPZL1O95297 269 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SMC2O95347 1197 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CST1P01037 141 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUX4L2P0CJ85 424 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUX4L3P0CJ86 424 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUX4L5P0CJ88 424 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms